RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 KCNC3Q14003 757 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 LASP1Q14847 261 aaKnown RBP11.32□□□□□ -0.6
MSH6-204ENST00000445503 TEAD2Q15562 447 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 LRRC26Q2I0M4 334 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 AGAP6Q5VW22 663 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 PAQR6Q6TCH4 344 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 CCDC149Q6ZUS6 474 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 KLK6Q92876 244 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 RAD51AP1Q96B01 352 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 SLC35G5Q96KT7 338 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 AGAP4Q96P64 663 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 FERD3LQ96RJ6 166 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 TRIM45Q9H8W5 580 aaPredicted RBP11.32□□□□□ -0.6
MSH6-204ENST00000445503 ANKRA2Q9H9E1 313 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 SEC14L4Q9UDX3 406 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 MYLKQ15746 1914 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 CLEC2LP0C7M8 214 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 ACRP10323 421 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 HSD3B1P14060 373 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 ZNF30P17039 623 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 ZNF8P17098 575 aaPredicted RBP11.32□□□□□ -0.6
MSH6-204ENST00000445503 HSD3B2P26439 372 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 RNF144AP50876 292 aaPredicted RBP11.32□□□□□ -0.6
MSH6-204ENST00000445503 LRIT3Q3SXY7 679 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 SMARCD3Q6STE5 483 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 ASB18Q6ZVZ8 466 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 FLCNQ8NFG4 579 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 OR5D16Q8NGK9 328 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 KCTD7Q96MP8 289 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 QRFPRQ96P65 431 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 SLC46A2Q9BY10 475 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 ENTPD4Q9Y227 616 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 NEUROG3Q9Y4Z2 214 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 OR51B4Q9Y5P0 310 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 RALGAPA2Q2PPJ7 1873 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 SERPINI2O75830 405 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 PCCBP05166 539 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 CCNYL3P0C7X3 344 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 TALDO1P37837 337 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 RPS19P39019 145 aaKnown RBP11.32□□□□□ -0.6
MSH6-204ENST00000445503 MAP4K2Q12851 820 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 MTAPQ13126 283 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 MZT2BQ6NZ67 158 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 C16orf62Q7Z3J2 963 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 FCRL4Q96PJ5 515 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 OR4K3Q96R72 315 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 MACROD1Q9BQ69 325 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 RHBGQ9H310 441 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 KLHL28Q9NXS3 571 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 PADI2Q9Y2J8 665 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 UGT2A1Q9Y4X1 527 aa11.32□□□□□ -0.6
MSH6-204ENST00000445503 AP3D1O14617 1153 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 KMOO15229 486 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 FRS3O43559 492 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 NDUFB5O43674 189 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 GPX5O75715 221 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 FGBP02675 491 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 NCBP2P52298 156 aaKnown RBP eCLIP11.31□□□□□ -0.61e-9■□□□□ 10.8
MSH6-204ENST00000445503 HNRNPFP52597 415 aaKnown RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 TLE2Q04725 743 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 ZMAT1Q5H9K5 638 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 RD3Q7Z3Z2 195 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 TRAM1L1Q8N609 369 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 ASCC1Q8N9N2 400 aaKnown RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 DOK4Q8TEW6 326 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 TFGQ92734 400 aaPredicted RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 HDHD5Q9BXW7 423 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 KCNE1BA0A087WTH5 132 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 TBC1D3BA6NDS4 549 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 MRPS14O60783 128 aaKnown RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 CYP17A1P05093 508 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 ADH1AP07327 375 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 SLC2A2P11168 524 aaPredicted RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 UQCRC2P22695 453 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 PTPN6P29350 595 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 FCHO2Q0JRZ9 810 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 ZXDCQ2QGD7 858 aaPredicted RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 OR2G6Q5TZ20 316 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 LCN1P1Q5VSP4 162 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 FAM124AQ86V42 546 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 HORMAD2Q8N7B1 307 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 CXorf40AQ8TE69 158 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 IRF7Q92985 503 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 SAMD11Q96NU1 681 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 C17orf62Q9BQA9 187 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 DMRT3Q9NQL9 472 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 PCDHGA2Q9Y5H1 932 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 GFYI3L273 518 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 EIF3FO00303 357 aaPredicted RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 DSCR3O14972 297 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 SLC35G4P0C7Q5 338 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 MYL9P24844 172 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 UGT2B10P36537 528 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 RACK1P63244 317 aaKnown RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 CAP1Q01518 475 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 PRKCDQ05655 676 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 NXPE4Q6UWF7 544 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 MARCH9Q86YJ5 346 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 SIX5Q8N196 739 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 AP3S1Q92572 193 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms