RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 PPP2R1BP30154 601 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 MPIP34949 423 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 KHKP50053 298 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 CASP9P55211 416 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 RAB8AP61006 207 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 TP53BP2Q13625 1128 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 GNA13Q14344 377 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 FOXB2Q5VYV0 432 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 FBXO42Q6P3S6 717 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 OFCC1Q8IZS5 231 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 HORMAD2Q8N7B1 307 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 CADM4Q8NFZ8 388 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 OR56A1Q8NGH5 318 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 MS4A12Q9NXJ0 267 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 VNN3Q9NY84 501 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 KIF17Q9P2E2 1029 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 P2RX2Q9UBL9 471 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 ATG4BQ9Y4P1 393 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 ZNF780BQ9Y6R6 833 aa14.84□□□□□ -0.03
SNX13-204ENST00000444712 ZSCAN9O15535 394 aaPredicted RBP14.83□□□□□ -0.03
SNX13-204ENST00000444712 ERAL1O75616 437 aaKnown RBP14.83□□□□□ -0.03
SNX13-204ENST00000444712 STATHP02808 62 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 NR2F6P10588 404 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 BTN3A2P78410 334 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 KCNAB2Q13303 367 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 CEBPEQ15744 281 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 IQCCQ4KMZ1 466 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 RBM48Q5RL73 367 aaKnown RBP14.83□□□□□ -0.03
SNX13-204ENST00000444712 FCRL6Q6DN72 434 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 ARMC6Q6NXE6 501 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 FAM180BQ6P0A1 224 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 BORAQ6PGQ7 559 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 ISLR2Q6UXK2 745 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 SATL1Q86VE3 508 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 HS3ST5Q8IZT8 346 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 SETD9Q8NE22 299 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 UTP15Q8TED0 518 aaKnown RBP14.83□□□□□ -0.03
SNX13-204ENST00000444712 ZDHHC1Q8WTX9 485 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 SLC6A18Q96N87 628 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 MUS81Q96NY9 551 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 ZNF607Q96SK3 696 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 MBOAT4Q96T53 435 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 MACROD1Q9BQ69 325 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 ORAI3Q9BRQ5 295 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 TPSD1Q9BZJ3 242 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 GRIP2Q9C0E4 1043 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 TCEAL2Q9H3H9 227 aaPredicted RBP14.83□□□□□ -0.03
SNX13-204ENST00000444712 ZCCHC3Q9NUD5 404 aaKnown RBP14.83□□□□□ -0.03
SNX13-204ENST00000444712 DDX18Q9NVP1 670 aaKnown RBP14.83□□□□□ -0.03
SNX13-204ENST00000444712 HRASLS2Q9NWW9 162 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 PDP1Q9P0J1 537 aaPredicted RBP14.83□□□□□ -0.03
SNX13-204ENST00000444712 TMEFF2Q9UIK5 374 aaPredicted RBP14.83□□□□□ -0.03
SNX13-204ENST00000444712 PILRAQ9UKJ1 303 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 FBXL21Q9UKT6 434 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 CES1P1Q9UKY3 287 aa14.83□□□□□ -0.03
SNX13-204ENST00000444712 LOC100130705A0A1B0GUX0 176 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 TRIM64CA6NLI5 447 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 CLIC3O95833 236 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 BCHEP06276 602 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 ZNF888P0CJ79 500 aaPredicted RBP14.83□□□□□ -0.04
SNX13-204ENST00000444712 JUNDP17535 347 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 NELFEP18615 380 aaKnown RBP14.83□□□□□ -0.04
SNX13-204ENST00000444712 TLX1P31314 330 aaPredicted RBP14.83□□□□□ -0.04
SNX13-204ENST00000444712 SH3BGRP55822 239 aaPredicted RBP14.83□□□□□ -0.04
SNX13-204ENST00000444712 PRR5P85299 388 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 HHEXQ03014 270 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 TOP3AQ13472 1001 aaPredicted RBP14.83□□□□□ -0.04
SNX13-204ENST00000444712 GAS6Q14393 721 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 ELOCQ15369 112 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 KDM4DQ6B0I6 523 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 TNFAIP8L2Q6P589 184 aaPredicted RBP14.83□□□□□ -0.04
SNX13-204ENST00000444712 RNF44Q7L0R7 432 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 TRIM73Q86UV7 250 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 PIK3C3Q8NEB9 887 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 BAHD1Q8TBE0 780 aaPredicted RBP14.83□□□□□ -0.04
SNX13-204ENST00000444712 ZNF300Q96RE9 604 aaPredicted RBP14.83□□□□□ -0.04
SNX13-204ENST00000444712 TMEM121BQ9BXQ6 578 aaPredicted RBP14.83□□□□□ -0.04
SNX13-204ENST00000444712 C3orf14Q9HBI5 128 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 BLOC1S6Q9UL45 172 aa14.83□□□□□ -0.04
SNX13-204ENST00000444712 A0A0J9YVX5 310 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 MYOCOSA0A1B0GUC4 107 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 FAM170BA6NMN3 283 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 METTL12A8MUP2 240 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 TMEM229AB2RXF0 380 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 B3GALT2O43825 422 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 JRKO75564 520 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 DNAJB5O75953 348 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 OPN1SWP03999 348 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 TFPTP0C1Z6 253 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 SMIM10L1P0DMW3 83 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 PRKACGP22612 351 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 CD38P28907 300 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 TNFRSF17Q02223 184 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 KCNC4Q03721 635 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 NADK2Q4G0N4 442 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 KLHL35Q6PF15 583 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 KCT2Q8NC54 265 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 ADAMTS16Q8TE57 1224 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 SLC38A5Q8WUX1 472 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 DGCR14Q96DF8 476 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms