RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 LYSMD2Q8IV50 215 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 UMODL1-AS1Q8N2C9 162 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 CLIP4Q8N3C7 705 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 TAB3Q8N5C8 712 aaPredicted RBP6.14□□□□□ -1.43
HDAC6-210ENST00000441703 RNF148Q8N7C7 305 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 BPIFB6Q8NFQ5 453 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 CA5BP1Q8WTZ4 195 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 NTAN1Q96AB6 310 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 AURKBQ96GD4 344 aaPredicted RBP6.14□□□□□ -1.43
HDAC6-210ENST00000441703 LRFN5Q96NI6 719 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 AGAP4Q96P64 663 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 AIFM2Q9BRQ8 373 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 LRRC40Q9H9A6 602 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 EIF2B3Q9NR50 452 aaKnown RBP6.14□□□□□ -1.43
HDAC6-210ENST00000441703 ACTR3BQ9P1U1 418 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 TBC1D29Q9UFV1 150 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 ZNF229Q9UJW7 825 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 KCNK6Q9Y257 313 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 NDUFAF1Q9Y375 327 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 GRIP1Q9Y3R0 1128 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 MAU2Q9Y6X3 613 aa6.14□□□□□ -1.43
HDAC6-210ENST00000441703 NCOA6Q14686 2063 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 A0A1W2PQ67 120 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 PABPN1LA6NDY0 278 aaKnown RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 OR5K3A6NET4 321 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 ZNF99A8MXY4 864 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 M0R3G1 203 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 APOL1O14791 398 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 MRASO14807 208 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 AURKAO14965 403 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 PRAMEF11O60813 436 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 PMPCBO75439 489 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 GPC4O75487 556 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 CCNKO75909 580 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 SUPT7LO94864 414 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 KCNK2O95069 426 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 HPRP00739 348 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 JCHAINP01591 159 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 CYP2A6P11509 494 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 ACP5P13686 325 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 AGXTP21549 392 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 PSMA4P25789 261 aaKnown RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 MIPP30301 263 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 UGT2B10P36537 528 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 DDOSTP39656 456 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 FOLR3P41439 243 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 CAPZBP47756 277 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 AP2S1P53680 142 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 DNAJB13P59910 316 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 COPZ1P61923 177 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 AP1S1P61966 158 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 UBE2IP63279 158 aaKnown RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 RIPPLY1Q0D2K3 151 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 AIMP2Q13155 320 aaKnown RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 FADDQ13158 208 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 MYBPHQ13203 477 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 SSPNQ14714 243 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 NCF4Q15080 339 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 CDSNQ15517 529 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 ARL13AQ5H913 290 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 CEP78Q5JTW2 689 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 PLEKHS1Q5SXH7 462 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 C6orf141Q5SZD1 244 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 RSBN1Q5VWQ0 802 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 NXNQ6DKJ4 435 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 LCN10Q6JVE6 187 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 LRRC8EQ6NSJ5 796 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 FAM198BQ6UWH4 519 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 CYP4V2Q6ZWL3 525 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 STRADAQ7RTN6 431 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 PIWIL3Q7Z3Z3 882 aaKnown RBP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 HSD11B1LQ7Z5J1 315 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 ADCK1Q86TW2 530 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 PHYKPLQ8IUZ5 450 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 LIX1LQ8IVB5 337 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 DDIASQ8IXT1 998 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 SYTL1Q8IYJ3 562 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 ADGRG5Q8IZF4 528 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 SVOPQ8N4V2 548 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 PLD5Q8N7P1 536 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 FAM156AQ8NDB6 213 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 IL17RDQ8NFM7 739 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 OR1N1Q8NGS0 311 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 OR8K5Q8NH50 307 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 DYNC2LI1Q8TCX1 351 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 RSC1A1Q92681 617 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 HDAC10Q969S8 669 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.13□□□□□ -1.43
HDAC6-210ENST00000441703 YIPF6Q96EC8 236 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 FBXL20Q96IG2 436 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 VPS35Q96QK1 796 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 SLC39A3Q9BRY0 314 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 NDC1Q9BTX1 674 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 GON7Q9BXV9 100 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 MMP27Q9H306 513 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 NMRAL1Q9HBL8 299 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 SNX15Q9NRS6 342 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 SYBUQ9NX95 663 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 P4HTMQ9NXG6 502 aa6.13□□□□□ -1.43
HDAC6-210ENST00000441703 DNAJB12Q9NXW2 375 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 373.2 ms