RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SEMA3GQ9NS98 782 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 NDUFAF4Q9P032 175 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 PDP1Q9P0J1 537 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 FBXW2Q9UKT8 454 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 CES1P1Q9UKY3 287 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 CA14Q9ULX7 337 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 PCDHGB3Q9Y5G1 929 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 LOC100130705A0A1B0GUX0 176 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 GSAPA4D1B5 854 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 C5orf58C9J3I9 102 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 HMGN4O00479 90 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 PGRMC2O15173 223 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 CTSVO60911 334 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 JRKO75564 520 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 PRKRAO75569 313 aaKnown RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 PDE9AO76083 593 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 TFPTP0C1Z6 253 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF888P0CJ79 500 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 ITGA2P17301 1181 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 CDH2P19022 906 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 CSNK2A2P19784 350 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 RRM2P31350 389 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 GPC1P35052 558 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 DAPP51397 102 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 NCBP2P52298 156 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 CDH15P55291 814 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 RPS26P62854 115 aaKnown RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 BTN3A2P78410 334 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 FZD5Q13467 585 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 TP53BP2Q13625 1128 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 LEXMQ3ZCV2 418 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 RBM48Q5RL73 367 aaKnown RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 C18orf63Q68DL7 685 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 TAF8Q7Z7C8 310 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 RBM12BQ8IXT5 1001 aaKnown RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 KCT2Q8NC54 265 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 CAMKVQ8NCB2 501 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 PIK3C3Q8NEB9 887 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 OR10G6Q8NH81 332 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 SUN3Q8TAQ9 357 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 SLC38A5Q8WUX1 472 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 NCSTNQ92542 709 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 RSC1A1Q92681 617 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 HDAC2Q92769 488 aaKnown RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 MOAP1Q96BY2 351 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 DGCR14Q96DF8 476 aaKnown RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 CNRIP1Q96F85 164 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 TMEM19Q96HH6 336 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 SLC35G5Q96KT7 338 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 SLC6A18Q96N87 628 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 FCRL4Q96PJ5 515 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF300Q96RE9 604 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 PCED1AQ9H1Q7 454 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 SERHL2Q9H4I8 314 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 RUBCNLQ9H714 662 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 LTB4R2Q9NPC1 389 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 GIMAP4Q9NUV9 329 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 DDX18Q9NVP1 670 aaKnown RBP11.14□□□□□ -0.63
SMAD3-202ENST00000439724 RAB23Q9ULC3 237 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 ENTPD4Q9Y227 616 aa11.14□□□□□ -0.63
SMAD3-202ENST00000439724 A0A0J9YY10 115 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 URADA6NGE7 173 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 PRAMEF25A6NGN4 478 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 GLOD5A6NK44 160 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 P2RX6O15547 441 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 PRAMEF10O60809 474 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 UGT2B11O75310 529 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 DNAJB5O75953 348 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 OR6B1O95007 311 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 BCHEP06276 602 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 CELA2BP08218 269 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-202ENST00000439724 NR2F6P10588 404 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 CTSEP14091 401 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 PAX7P23759 505 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 RYKP34925 604 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 KHKP50053 298 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 HLCSP50747 726 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 ANXA11P50995 505 aaKnown RBP11.13□□□□□ -0.63
SMAD3-202ENST00000439724 TPD52P55327 224 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-202ENST00000439724 KEAP1Q14145 624 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 LAPTM4AQ15012 233 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 SUZ12Q15022 739 aaKnown RBP11.13□□□□□ -0.63
SMAD3-202ENST00000439724 MAPK11Q15759 364 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF542PQ5EBM4 170 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF691Q5VV52 312 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 BHLHB9Q6PI77 547 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 RNF44Q7L0R7 432 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 FRMD1Q8N878 549 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 OR56A1Q8NGH5 318 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 OR4C15Q8NGM1 316 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 BAHD1Q8TBE0 780 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-202ENST00000439724 FBLIM1Q8WUP2 373 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 RLN3Q8WXF3 142 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 HLA-CQ95604 372 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 SERINC2Q96SA4 455 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 TSC22D3Q99576 134 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 MAPKAP1Q9BPZ7 522 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 ZFYVE21Q9BQ24 234 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 TPSD1Q9BZJ3 242 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 ING2Q9H160 280 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms