RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 BTG1P62324 171 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 SRPXP78539 464 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 HTD2P86397 168 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 FKBP3Q00688 224 aaKnown RBP3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 KLHL30Q0D2K2 578 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 NPRL3Q12980 569 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 ZNF146Q15072 292 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 MLF2Q15773 248 aaPredicted RBP3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 LYPLAL1Q5VWZ2 237 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 KCTD11Q693B1 232 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 FBXL22Q6P050 247 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 TMEM64Q6YI46 380 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 SIGLEC15Q6ZMC9 328 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 PPP1R42Q7Z4L9 355 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 ASPGQ86U10 573 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 GTSCR1Q86UQ5 136 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 RNF130Q86XS8 419 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 TBC1D10CQ8IV04 446 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 PHC2Q8IXK0 858 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 TBC1D21Q8IYX1 336 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 OR6F1Q8NGZ6 308 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 C11orf45Q8TAV5 145 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 BRSK1Q8TDC3 778 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 ZNF606Q8WXB4 792 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 SMPDL3AQ92484 453 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 RASL10AQ92737 203 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 PDLIM5Q96HC4 596 aaKnown RBP3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 ALKBH3Q96Q83 286 aaPredicted RBP3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 ATF6BQ99941 703 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 CHCHD5Q9BSY4 110 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 STRADBQ9C0K7 418 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 NT5C3AQ9H0P0 336 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 TUBB1Q9H4B7 451 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 SP140LQ9H930 580 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 MARCH7Q9H992 704 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 FANCFQ9NPI8 374 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 TAS2R3Q9NYW6 316 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 GTSE1Q9NYZ3 720 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 EXTL2Q9UBQ6 330 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 ZMAT5Q9UDW3 170 aaKnown RBP3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 MAD2L2Q9UI95 211 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 FBXW2Q9UKT8 454 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 CFAP45Q9UL16 551 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 KCNK6Q9Y257 313 aa3.13□□□□□ -1.91
LSM1P1-201ENST00000438629 IGLV4-3A0A075B6K6 122 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 LINC00854A0A1B0GVQ3 168 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 TMEM129A0AVI4 362 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 BCLAF3A2AJT9 711 aaKnown RBP3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 KRTAP16-1A8MUX0 517 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 EPM2AB3EWF7 344 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 G3V2L1 256 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 PDHXO00330 501 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 NME6O75414 186 aaPredicted RBP3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 REC8O95072 547 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 HPRP00739 348 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 LYNP07948 512 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 CCDC192P0DO97 292 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 HSPA5P11021 654 aaKnown RBP3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 SFTPCP11686 197 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 FERP16591 822 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 PPP2R1AP30153 589 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 OXTRP30559 389 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 MAGEA8P43361 318 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 SERPINH1P50454 418 aaKnown RBP3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 RIDAP52758 137 aaKnown RBP3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 STARD6P59095 220 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 PAX8Q06710 450 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 RBBP4Q09028 425 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 LCP2Q13094 533 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 SPHARQ15513 63 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 SHROOM1Q2M3G4 852 aaPredicted RBP3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 AARDQ4LEZ3 155 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 C1orf189Q5VU69 101 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 PAQR6Q6TCH4 344 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 PRSS42Q7Z5A4 293 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 RABEPKQ7Z6M1 372 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 TMEM110Q86TL2 294 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 C17orf64Q86WR6 236 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 LAX1Q8IWV1 398 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 ZBTB44Q8NCP5 570 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 ZNF540Q8NDQ6 660 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 LPCAT1Q8NF37 534 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 SAP25Q8TEE9 199 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 TCP11Q8WWU5 503 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 CTNNBL1Q8WYA6 563 aaPredicted RBP3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 ZNF75CPQ92670 426 aaPredicted RBP3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 PRCCQ92733 491 aaPredicted RBP3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 ANKRD27Q96NW4 1050 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 RUFY1Q96T51 708 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 TCHPQ9BT92 498 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 CACNG6Q9BXT2 260 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 NMUR1Q9HB89 426 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 MED17Q9NVC6 651 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 PLEK2Q9NYT0 353 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 CTSZQ9UBR2 303 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 CLIP2Q9UDT6 1046 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 PILRAQ9UKJ1 303 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 AURKCQ9UQB9 309 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 AUP1Q9Y679 476 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 CACNA1FO60840 1977 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms