RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 MACROD2A1Z1Q3 448 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SERINC4A6NH21 518 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CD3EAPO15446 510 aaKnown RBP11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ST8SIA5O15466 376 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 OR1F1O43749 312 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SPOPO43791 374 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 NRDCO43847 1150 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TMCC2O75069 709 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 THBDP07204 575 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TMEM253P0C7T8 217 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PTMSP20962 102 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CD79BP40259 229 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 GRIA1P42261 906 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TTPAP49638 278 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CASP9P55211 416 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 DEFA6Q01524 100 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RCAN2Q14206 197 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PARP6Q2NL67 630 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 NHSL2Q5HYW2 709 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 AARS2Q5JTZ9 985 aaKnown RBP11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 LIPNQ5VXI9 398 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SH2D5Q6ZV89 423 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RELL1Q8IUW5 271 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TC2NQ8N9U0 490 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 OR10G3Q8NGC4 313 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ZPLD1Q8TCW7 415 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ABTB1Q969K4 478 aaPredicted RBP11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ZNF837Q96EG3 531 aaPredicted RBP11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PPP1R2P1Q96PQ5 205 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PANX2Q96RD6 677 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 FAM129AQ9BZQ8 928 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 AICDAQ9GZX7 198 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ADAP2Q9NPF8 381 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PRTFDC1Q9NRG1 225 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CNOT11Q9UKZ1 510 aaKnown RBP11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 DTX4Q9Y2E6 619 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CHCHD2Q9Y6H1 151 aaPredicted RBP11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CLCA3PQ9Y6N3 262 aa11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 YLPM1P49750 1951 aaKnown RBP11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 A0A1W2PNV4 684 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 MSTNO14793 375 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TRIM3O75382 744 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 NDUFS3O75489 264 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 IFNA16P05015 189 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 HPNP05981 417 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SOD3P08294 240 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SMIM10L1P0DMW3 83 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CYP4B1P13584 511 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CHRM3P20309 590 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 IGFBP5P24593 272 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SKIV2L2P42285 1042 aaKnown RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SLC1A1P43005 524 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CDK9P50750 372 aaKnown RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 NAGLUP54802 743 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SKP1P63208 163 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SLC13A2Q13183 592 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RUNX2Q13950 521 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ELAVL1Q15717 326 aaKnown RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CCDC181Q5TID7 509 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 VWA1Q6PCB0 445 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RBM43Q6ZSC3 357 aaKnown RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 C17orf64Q86WR6 236 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TMEM132CQ8N3T6 1108 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PPM1NQ8N819 430 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 FAM13CQ8NE31 585 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PPHLN1Q8NEY8 458 aaKnown RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 NT5CQ8TCD5 201 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ASB11Q8WXH4 323 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 AKAP1Q92667 903 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 STARD4Q96DR4 205 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TRMT61AQ96FX7 289 aaKnown RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SMIM10Q96HG1 83 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 NSUN5Q96P11 429 aaKnown RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 QRFPRQ96P65 431 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TM9SF2Q99805 663 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 DOHHQ9BU89 302 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 G6PC3Q9BUM1 346 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 OPN3Q9H1Y3 402 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SPNS1Q9H2V7 528 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 UBQLN3Q9H347 655 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 EIF2B3Q9NR50 452 aaKnown RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 GDF2Q9UK05 429 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RIMKLBQ9ULI2 386 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PCDHA13Q9Y5I0 950 aa11.16□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 LRRC14BA6NHZ5 514 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PSTPIP1O43586 416 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ADRA1DP25100 572 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 GRK3P35626 688 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CCZ1BP86790 482 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CCZ1P86791 482 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SRYQ05066 204 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CUL1Q13616 776 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 FNDC7Q5VTL7 733 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 BICRALQ6AI39 1079 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 NIPAL1Q6NVV3 410 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SASS6Q6UVJ0 657 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 MBOAT1Q6ZNC8 495 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ADGRE4PQ86SQ3 457 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms