RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SHEQ5VZ18 495 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 ABHD17CQ6PCB6 329 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 SLCO4C1Q6ZQN7 724 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 LACC1Q8IV20 430 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 P3H2Q8IVL5 708 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 OR4N5Q8IXE1 308 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 LRRC25Q8N386 305 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-213ENST00000436675 OR2L5Q8NG80 312 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 OR10G3Q8NGC4 313 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 SLC22A8Q8TCC7 542 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 SPACA9Q96E40 222 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-213ENST00000436675 F2RL3Q96RI0 385 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 MAPKAP1Q9BPZ7 522 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 PRM3Q9NNZ6 103 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 SH2D2AQ9NP31 389 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 ACKR4Q9NPB9 350 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 ZNF629Q9UEG4 869 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-213ENST00000436675 MXRA5Q9NR99 2828 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 FAM171A2A8MVW0 826 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 HRKO00198 91 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 ARHGEF9O43307 516 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 SH3BGRLO75368 114 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 TBX6O95947 436 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-213ENST00000436675 HRGP04196 525 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 PGAM1P18669 254 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 GNAZP19086 355 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 CRYZQ08257 329 aaKnown RBP13.6□□□□□ -0.23
HDAC8-213ENST00000436675 RCN2Q14257 317 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 EFTUD2Q15029 972 aaKnown RBP eCLIP13.6□□□□□ -0.23
HDAC8-213ENST00000436675 PPP1R3AQ16821 1122 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 MPEG1Q2M385 716 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 LYPD8Q6UX82 237 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 DGAT2L6Q6ZPD8 337 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 VN1R5Q7Z5H4 357 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 CXorf67Q86X51 503 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-213ENST00000436675 C9orf40Q8IXQ3 194 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 TTLQ8NG68 377 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 PAQR8Q8TEZ7 354 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 PPWD1Q96BP3 646 aaKnown RBP13.6□□□□□ -0.23
HDAC8-213ENST00000436675 SENP5Q96HI0 755 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-213ENST00000436675 TRIB1Q96RU8 372 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 TIMP4Q99727 224 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 WDR83Q9BRX9 315 aaKnown RBP13.6□□□□□ -0.23
HDAC8-213ENST00000436675 PPANQ9NQ55 473 aaKnown RBP13.6□□□□□ -0.23
HDAC8-213ENST00000436675 VWA7Q9Y334 891 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 SLC6A5Q9Y345 797 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 PCDHGB3Q9Y5G1 929 aa13.6□□□□□ -0.23
HDAC8-213ENST00000436675 RTCAO00442 366 aaKnown RBP13.59□□□□□ -0.23
HDAC8-213ENST00000436675 CLEC3AO75596 197 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 ACSL3O95573 720 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 TIMP3P35625 211 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 MSH2P43246 934 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 SERTAD2Q14140 314 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 ZNF460Q14592 562 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 FBXO48Q5FWF7 155 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 TMEM64Q6YI46 380 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 CXXC5Q7LFL8 322 aaKnown RBP13.59□□□□□ -0.23
HDAC8-213ENST00000436675 KRT78Q8N1N4 520 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 RASGEF1CQ8N431 466 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 NAT8LQ8N9F0 302 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 NANOS1Q8WY41 292 aaKnown RBP13.59□□□□□ -0.23
HDAC8-213ENST00000436675 MAGOHBQ96A72 148 aaKnown RBP13.59□□□□□ -0.23
HDAC8-213ENST00000436675 ANKRD9Q96BM1 317 aaPredicted RBP13.59□□□□□ -0.23
HDAC8-213ENST00000436675 HSPBAP1Q96EW2 488 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 COX4I2Q96KJ9 171 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 Q96MF0 132 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 GAL3ST4Q96RP7 486 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 DOHHQ9BU89 302 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 PRDM7Q9NQW5 492 aa13.59□□□□□ -0.23
HDAC8-213ENST00000436675 SONP18583 2426 aaKnown RBP13.58□□□□□ -0.24
HDAC8-213ENST00000436675 SYNDIG1LA6NDD5 238 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 NCF1BA6NI72 391 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-213ENST00000436675 NCF1CA8MVU1 366 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-213ENST00000436675 INAFM1C9JVW0 142 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 CLGNO14967 610 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 COX7A2P14406 83 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 NCF1P14598 390 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-213ENST00000436675 CTSSP25774 331 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 TOMM20Q15388 145 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 ADPRMQ3LIE5 342 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 NSUN5P2Q63ZY6 315 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 BICRALQ6AI39 1079 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 FAM45BPQ6NSW5 357 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 ZNF793Q6ZN11 406 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 SPC24Q8NBT2 197 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 GABPB2Q8TAK5 448 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-213ENST00000436675 NUBPLQ8TB37 319 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 FAM45AQ8TCE6 357 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 ZNF592Q92610 1267 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 DGAT2Q96PD7 388 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 RBM24Q9BX46 236 aaKnown RBP13.58□□□□□ -0.24
HDAC8-213ENST00000436675 QPCTLQ9NXS2 382 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 CNIH4Q9P003 139 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 CNOT11Q9UKZ1 510 aaKnown RBP13.58□□□□□ -0.24
HDAC8-213ENST00000436675 CHCHD2Q9Y6H1 151 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-213ENST00000436675 MED12LQ86YW9 2145 aa13.58□□□□□ -0.24
HDAC8-213ENST00000436675 HEATR5AQ86XA9 2040 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 TRIM64A6NGJ6 449 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 FGF17O60258 216 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms