RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 I3L1I5 382 aaPredicted RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 SGK494L7N484 410 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 SCAMP2O15127 329 aaKnown RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 PRODHO43272 600 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 ZNF749O43361 778 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 PROM1O43490 865 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 HYAL3O43820 417 aaPredicted RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 SCN2BO60939 215 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 UNC5CO95185 931 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 FURINP09958 794 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 PIM1P11309 404 aaPredicted RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 IL1RNP18510 177 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 CALB2P22676 271 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 CCKBRP32239 447 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 ASMTP46597 345 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 CLNS1AP54105 237 aaKnown RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 HNRNPH2P55795 449 aaKnown RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 ITGA1P56199 1179 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 WNT3P56703 355 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 CLDN6P56747 220 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 KCNK10P57789 538 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 TRA2BP62995 288 aaKnown RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 OLR1P78380 273 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 ACY1Q03154 408 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 KLC1Q07866 573 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 C2orf80Q0P641 193 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 PDE7AQ13946 482 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC9A5Q14940 896 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 MPEG1Q2M385 716 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 FAM174BQ3ZCQ3 159 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 CCDC157Q569K6 752 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 SPANXN4Q5MJ08 99 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 GARNL3Q5VVW2 1013 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 C18orf63Q68DL7 685 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 ANKRD26P1Q6NSI1 321 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 RBM44Q6ZP01 1051 aaKnown RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 RINLQ6ZS11 566 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 CCDC121Q6ZUS5 278 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 IKBIPQ70UQ0 350 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 CAMKMTQ7Z624 323 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 SLCO6A1Q86UG4 719 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 GPR180Q86V85 440 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 TMEM132CQ8N3T6 1108 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 BMPERQ8N8U9 685 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 GLB1L3Q8NCI6 653 aaPredicted RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 DEFB124Q8NES8 71 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 OR5T3Q8NGG3 340 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 CDC26Q8NHZ8 85 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 TSPEARQ8WU66 669 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 RNF141Q8WVD5 230 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 N4BP2L2Q92802 583 aaPredicted RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 VPS33AQ96AX1 596 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 TESCQ96BS2 214 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC7A6OSQ96CW6 309 aaPredicted RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 RCN3Q96D15 328 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 COQ8BQ96D53 544 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 SPDL1Q96EA4 605 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 OR6C1Q96RD1 312 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 ZBTB18Q99592 522 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 NPAS2Q99743 824 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 MAPKAP1Q9BPZ7 522 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 TUBB6Q9BUF5 446 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC25A23Q9BV35 468 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 ROGDIQ9GZN7 287 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 REEP4Q9H6H4 257 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 GP6Q9HCN6 339 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 TEX10Q9NXF1 929 aaPredicted RBP6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 RAPGEFL1Q9UHV5 662 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 ATP6V1HQ9UI12 483 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 SERTAD3Q9UJW9 196 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 EMC9Q9Y3B6 208 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 PCDHA9Q9Y5H5 950 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 FANCMQ8IYD8 2048 aa6.64□□□□□ -1.35
LSM3P3-201ENST00000436601 A0A088AWK7 358 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 A0A0C4DFX4 3053 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 SPAARA0A1B0GVQ0 90 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 CCDC154A6NI56 674 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 EFCAB7A8K855 629 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 FAM227AF5H4B4 570 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 GNB5O14775 395 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 AIM2O14862 343 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 PGRMC2O15173 223 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 SHOXO15266 292 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 CHST10O43529 356 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 B3GALT2O43825 422 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 TBX19O60806 448 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 RDH16O75452 317 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 PRKRAO75569 313 aaKnown RBP6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 AIFM1O95831 613 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 MT-CO3P00414 261 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 IL6P05231 212 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 LAMP1P11279 417 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 FGF5P12034 268 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 CCL4P13236 92 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 COX7A2P14406 83 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 CPEP16870 476 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 ITGAXP20702 1163 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 DDCP20711 480 aa6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 COL5A1P20908 1838 aaPredicted RBP6.63□□□□□ -1.35
LSM3P3-201ENST00000436601 CSRP1P21291 193 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms