RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 APIPQ96GX9 242 aa17.16■□□□□ 0.34
HLA-F-220ENST00000434407 NPAS2Q99743 824 aa17.16■□□□□ 0.34
HLA-F-220ENST00000434407 TEX10Q9NXF1 929 aaPredicted RBP17.16■□□□□ 0.34
HLA-F-220ENST00000434407 PTGFRNQ9P2B2 879 aa17.16■□□□□ 0.34
HLA-F-220ENST00000434407 MCM8Q9UJA3 840 aa17.16■□□□□ 0.34
HLA-F-220ENST00000434407 SHANK1Q9Y566 2161 aa17.16■□□□□ 0.34
HLA-F-220ENST00000434407 ARHGAP10A1A4S6 786 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 WASHC1A8K0Z3 465 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 A8MUA0 341 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 PGRMC2O15173 223 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 MYO1DO94832 1006 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 GPR75O95800 540 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 PRPH2P23942 346 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 SLC18A1P54219 525 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 UGT3A2Q3SY77 523 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 NADK2Q4G0N4 442 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 NDUFAF5Q5TEU4 345 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 KANK2Q63ZY3 851 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 B3GNTL1Q67FW5 361 aaPredicted RBP17.15■□□□□ 0.34
HLA-F-220ENST00000434407 SLC6A19Q695T7 634 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 OR4N5Q8IXE1 308 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 TMEM132CQ8N3T6 1108 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 HAS2Q92819 552 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 UCN3Q969E3 161 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 PNPLA2Q96AD5 504 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 METTL2AQ96IZ6 378 aaKnown RBP17.15■□□□□ 0.34
HLA-F-220ENST00000434407 PKNOX2Q96KN3 472 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 RNF32Q9H0A6 362 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 EPS8L2Q9H6S3 715 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 WDR41Q9HAD4 459 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 KCNK13Q9HB14 408 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 EML4Q9HC35 981 aaKnown RBP17.15■□□□□ 0.34
HLA-F-220ENST00000434407 CES1P1Q9UKY3 287 aa17.15■□□□□ 0.34
HLA-F-220ENST00000434407 HEMK1Q9Y5R4 338 aaPredicted RBP17.15■□□□□ 0.34
HLA-F-220ENST00000434407 MYOCOSA0A1B0GUC4 107 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 GOLGA6L10A6NI86 522 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 GUCY1B2O75343 617 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 CRCPO75575 148 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 RSL1D1O76021 490 aaKnown RBP17.14■□□□□ 0.33
HLA-F-220ENST00000434407 SORBS2O94875 1100 aaKnown RBP17.14■□□□□ 0.33
HLA-F-220ENST00000434407 STT3AP46977 705 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 ID2Q02363 134 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 ACSM2AQ08AH3 577 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 ACSM2BQ68CK6 577 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 OR52E8Q6IFG1 317 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 LINC00696Q6ZRV3 163 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 CLYBLQ8N0X4 340 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 LGI4Q8N135 537 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 KIF2BQ8N4N8 673 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 Q8NA96 180 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 MORN4Q8NDC4 146 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 OR14A16Q8NHC5 309 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 DAZLQ92904 295 aaKnown RBP17.14■□□□□ 0.33
HLA-F-220ENST00000434407 TUBB1Q9H4B7 451 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 KCNK9Q9NPC2 374 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 ZNF223Q9UK11 482 aaPredicted RBP17.14■□□□□ 0.33
HLA-F-220ENST00000434407 B3GNT3Q9Y2A9 372 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 TRAF6Q9Y4K3 522 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 PCDHA9Q9Y5H5 950 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 DNAJC15Q9Y5T4 150 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 SVILO95425 2214 aa17.14■□□□□ 0.33
HLA-F-220ENST00000434407 GLOD5A6NK44 160 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 CDK2AP1O14519 115 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 DDAH2O95865 285 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 IFNA16P05015 189 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 SERPINE1P05121 402 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 TIA1P31483 386 aaKnown RBP eCLIP17.13■□□□□ 0.33
HLA-F-220ENST00000434407 GALNSP34059 522 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 MAGOHP61326 146 aaKnown RBP17.13■□□□□ 0.33
HLA-F-220ENST00000434407 PLEKHN1Q494U1 663 aaPredicted RBP17.13■□□□□ 0.33
HLA-F-220ENST00000434407 ACER2Q5QJU3 275 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 AGBL2Q5U5Z8 902 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 Q6ZSR9 355 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 ST13P4Q8IZP2 240 aaPredicted RBP17.13■□□□□ 0.33
HLA-F-220ENST00000434407 FAM76AQ8TAV0 307 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 NCLNQ969V3 563 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 VMP1Q96GC9 406 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 ZNF354BQ96LW1 612 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 MFRPQ9BY79 579 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 ARGLU1Q9NWB6 273 aaPredicted RBP17.13■□□□□ 0.33
HLA-F-220ENST00000434407 STMN3Q9NZ72 180 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 TEKT2Q9UIF3 430 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 CSAG2Q9Y5P2 127 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 CLCA3PQ9Y6N3 262 aa17.13■□□□□ 0.33
HLA-F-220ENST00000434407 MYO18BQ8IUG5 2567 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 TMEM120BA0PK00 339 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 C1orf226A1L170 272 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 SLC28A1O00337 649 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 PCDH7O60245 1069 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 SLC35E2P0CK97 266 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 ALOX15P16050 662 aaPredicted RBP17.12■□□□□ 0.33
HLA-F-220ENST00000434407 GSTM5P46439 218 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 CLCN2P51788 898 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 WDR4P57081 412 aaKnown RBP17.12■□□□□ 0.33
HLA-F-220ENST00000434407 TAS2R50P59544 299 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 PLIN5Q00G26 463 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 KIAA0040Q15053 153 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 MEP1AQ16819 746 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 ABHD17BQ5VST6 288 aa17.12■□□□□ 0.33
HLA-F-220ENST00000434407 SLC48A1Q6P1K1 146 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms