RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SRRQ9GZT4 340 aa7.71□□□□□ -1.18
VTI1A-202ENST00000432306 C12orf10Q9HB07 376 aa7.71□□□□□ -1.18
VTI1A-202ENST00000432306 PDFQ9HBH1 243 aa7.71□□□□□ -1.18
VTI1A-202ENST00000432306 DYRK4Q9NR20 520 aa7.71□□□□□ -1.18
VTI1A-202ENST00000432306 PDP1Q9P0J1 537 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-202ENST00000432306 SNX6Q9UNH7 406 aa7.71□□□□□ -1.18
VTI1A-202ENST00000432306 ARL5AQ9Y689 179 aa7.71□□□□□ -1.18
VTI1A-202ENST00000432306 CACNA1AO00555 2505 aa7.71□□□□□ -1.18
VTI1A-202ENST00000432306 EVPLQ92817 2033 aa7.71□□□□□ -1.18
VTI1A-202ENST00000432306 CACNA1HO95180 2353 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 SLC22A31A6NKX4 558 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 A8MXE2 369 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 NUDT19A8MXV4 375 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 B8ZZF3 427 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 CCL22O00626 93 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 POLR1CO15160 346 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-202ENST00000432306 PGRMC2O15173 223 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 PROM1O43490 865 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 HLA-DQB1P01920 261 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 MMP3P08254 477 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 EBLN1P0CF75 366 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 HAPLN1P10915 354 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-202ENST00000432306 DBTP11182 482 aaKnown RBP7.7□□□□□ -1.18
VTI1A-202ENST00000432306 C6P13671 934 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 C21orf33P30042 268 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-202ENST00000432306 HLA-FP30511 346 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 KDELR2P33947 212 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 MAPKAPK2P49137 400 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 GMFBP60983 142 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 MAXP61244 160 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 WDR5P61964 334 aaKnown RBP7.7□□□□□ -1.18
VTI1A-202ENST00000432306 VLDLRP98155 873 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 FCHO2Q0JRZ9 810 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 HSPA14Q0VDF9 509 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 PTGR1Q14914 329 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 CARTPTQ16568 116 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 VMACQ2NL98 169 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 GGTA1PQ4G0N0 100 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 TIGD5Q53EQ6 642 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 ARMCX4Q5H9R4 360 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 CDKL4Q5MAI5 379 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 SUSD1Q6UWL2 747 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 GCNT7Q6ZNI0 430 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 IDO2Q6ZQW0 420 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 ZNF551Q7Z340 670 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-202ENST00000432306 STK40Q8N2I9 435 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 C10orf111Q8N326 155 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 NCLNQ969V3 563 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 OR52E6Q96RD3 313 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 GAL3ST1Q99999 423 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 MGME1Q9BQP7 344 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 LGR4Q9BXB1 951 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 GPR63Q9BZJ6 419 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 P2RY12Q9H244 342 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 REEP1Q9H902 201 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 RDH14Q9HBH5 336 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 SIRT5Q9NXA8 310 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 THUMPD1Q9NXG2 353 aaKnown RBP7.7□□□□□ -1.18
VTI1A-202ENST00000432306 STMN3Q9NZ72 180 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 CD274Q9NZQ7 290 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 TRMT6Q9UJA5 497 aaKnown RBP7.7□□□□□ -1.18
VTI1A-202ENST00000432306 STUB1Q9UNE7 303 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 DHRS7Q9Y394 339 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 SAMHD1Q9Y3Z3 626 aaKnown RBP7.7□□□□□ -1.18
VTI1A-202ENST00000432306 U3KQV3 271 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 SHROOM3Q8TF72 1996 aa7.7□□□□□ -1.18
VTI1A-202ENST00000432306 TEX51A0A1B0GUA7 166 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 LINC01553A4QN01 128 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 ARRDC5A6NEK1 342 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 CCRL2O00421 344 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 SSX4O60224 188 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 MPZL2O60487 215 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 PRAMEF11O60813 436 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 NDUFS3O75489 264 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 GJB5O95377 273 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 PLGP00747 810 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-202ENST00000432306 HMBSP08397 361 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 ZNF286BP0CG31 522 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 ANXA8P13928 327 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 SLC2A4P14672 509 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 RPS3P23396 243 aaKnown RBP eCLIP7.69□□□□□ -1.18
VTI1A-202ENST00000432306 FMO4P31512 558 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 TNFSF8P32971 234 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 ARL3P36405 182 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 PTGER3P43115 390 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 GZMKP49863 264 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 CLCN7P51798 805 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 RPL38P63173 70 aaKnown RBP7.69□□□□□ -1.18
VTI1A-202ENST00000432306 KCNJ10P78508 379 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 RHAGQ02094 409 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 ACY1Q03154 408 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 ZNF33BQ06732 778 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 PPP1R8Q12972 351 aaKnown RBP7.69□□□□□ -1.18
VTI1A-202ENST00000432306 CSTF3Q12996 717 aaKnown RBP7.69□□□□□ -1.18
VTI1A-202ENST00000432306 BOP1Q14137 746 aaKnown RBP7.69□□□□□ -1.18
VTI1A-202ENST00000432306 SUZ12Q15022 739 aaKnown RBP7.69□□□□□ -1.18
VTI1A-202ENST00000432306 ZNF79Q15937 498 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 TBRG1Q3YBR2 411 aa7.69□□□□□ -1.18
VTI1A-202ENST00000432306 GLYR1Q49A26 553 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-202ENST00000432306 GTDC1Q4AE62 458 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms