RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 HUS1BQ8NHY5 278 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 SENP5Q96HI0 755 aaPredicted RBP13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 DGAT2Q96PD7 388 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 GAL3ST4Q96RP7 486 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 PHACTR1Q9C0D0 580 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 MCCC2Q9HCC0 563 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 LYRM4Q9HD34 91 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 OPTCQ9UBM4 332 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 ATG4BQ9Y4P1 393 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 ANKRD17O75179 2603 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 DIAPH2O60879 1101 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 GLSO94925 669 aaPredicted RBP13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 P04436 131 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 TRPC1P48995 793 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 NEK2P51955 445 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 RAP1GDS1P52306 607 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 RPS13P62277 151 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 UAP1Q16222 522 aaPredicted RBP13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 KHDRBS2Q5VWX1 349 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 RTL6Q6ICC9 239 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 OR4C11Q6IEV9 310 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 LRRC70Q7Z2Q7 622 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 SLC22A16Q86VW1 577 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 TMEM200AQ86VY9 491 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 EID3Q8N140 333 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 SPATA4Q8NEY3 305 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 C14orf79Q96F83 325 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 ATOH8Q96SQ7 321 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 FAM173AQ9BQD7 235 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 TBCDQ9BTW9 1192 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 ZDHHC11Q9H8X9 412 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 KCNJ16Q9NPI9 418 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 SACM1LQ9NTJ5 587 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 WHRNQ9P202 907 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 SPRR3Q9UBC9 169 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 COPS7AQ9UBW8 275 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 ACAD8Q9UKU7 415 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 FAM215AQ9Y5M1 114 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 MED13LQ71F56 2210 aa13.16□□□□□ -0.3
SMARCE1-205ENST00000431889 A0A0G2JNJ9 132 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 KDM4EB2RXH2 506 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 K7EPI3 171 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 PLPP1O14494 284 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 EEDO75530 441 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 GLI4P10075 376 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ENDOUP21128 410 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 GSTM2P28161 218 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 SPRP35270 261 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ADH7P40394 386 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 HERVK_113P63132 956 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ERVK-8P63133 956 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 SLC7A5Q01650 507 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 FOXO1Q12778 655 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 LAPTM5Q13571 262 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 PFKFB4Q16877 469 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 GRTP1Q5TC63 336 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 MROH9Q5TGP6 573 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 TMEM211Q6ICI0 200 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 GK5Q6ZS86 529 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 TRILQ7L0X0 811 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 TBC1D1Q86TI0 1168 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 FAM13CQ8NE31 585 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 OR10G3Q8NGC4 313 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 STAG3L4Q8TBR4 150 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 FBXO25Q8TCJ0 367 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 CDK15Q96Q40 435 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ERVK-6Q9BXR3 956 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 PITHD1Q9GZP4 211 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 SLC6A15Q9H2J7 730 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 RPF2Q9H7B2 306 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 NUDT4Q9NZJ9 180 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 Q9UFV3 132 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ERVK-19Q9WJR5 959 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ESYT3A0FGR9 886 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 CDK2AP1O14519 115 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 SIX3O95343 332 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 NADKO95544 446 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 MTHFD2P13995 350 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ACVR2AP27037 513 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 MAGEA4P43358 317 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 STT3AP46977 705 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 MYBPHQ13203 477 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 SERTAD2Q14140 314 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 RCN2Q14257 317 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ZNF267Q14586 743 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 PIGGQ5H8A4 983 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 BICRALQ6AI39 1079 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 GRHL2Q6ISB3 625 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 PAOXQ6QHF9 649 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ZDHHC24Q6UX98 284 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 CHSY3Q70JA7 882 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 GPR180Q86V85 440 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 GPALPP1Q8IXQ4 340 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 LAS2Q8IYD9 372 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 FAM109AQ8N4B1 249 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 BBOF1Q8ND07 529 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ASB5Q8WWX0 329 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 CMTM7Q96FZ5 175 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 TTYH2Q9BSA4 534 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms