RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 SLC25A37Q9NYZ2 338 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-206ENST00000431390 CD300AQ9UGN4 299 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 UTS2RQ9UKP6 389 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 CES1P1Q9UKY3 287 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 PCDHGB4Q9UN71 923 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 L3MBTL1Q9Y468 752 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 ZNF860A6NHJ4 632 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 SGK494L7N484 410 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 NME4O00746 187 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 CIB2O75838 187 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 PDE5AO76074 875 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 MED26O95402 600 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 CPSF4O95639 269 aaKnown RBP17.2■□□□□ 0.34
HMGN1-206ENST00000431390 ME2P23368 584 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 GCGRP47871 477 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 RAB38P57729 211 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 MLC1Q15049 377 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 OR52E8Q6IFG1 317 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 HPS6Q86YV9 775 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 OR9A4Q8NGU2 314 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 OR5P2Q8WZ92 322 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 ZBED6CLQ96FA7 236 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-206ENST00000431390 CDC6Q99741 560 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 CUTCQ9NTM9 273 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 CMTM6Q9NX76 183 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 ZNF282Q9UDV7 671 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-206ENST00000431390 PSME2Q9UL46 239 aa17.2■□□□□ 0.34
HMGN1-206ENST00000431390 A0A0A6YYC8 382 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 H0YIG0 161 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 I3L1I5 382 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 PGRMC2O15173 223 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 DNAJA2O60884 412 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 RDH16O75452 317 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 PRKRAO75569 313 aaKnown RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 HSD17B1P14061 328 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 AVPR1BP47901 424 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 ARSFP54793 590 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 EEFSECP57772 596 aaKnown RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 OLR1P78380 273 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 ELF3P78545 371 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 ZFP36L1Q07352 338 aaKnown RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 ILKQ13418 452 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 GTDC1Q4AE62 458 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 RABL3Q5HYI8 236 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 C6orf163Q5TEZ5 329 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 NET1Q7Z628 596 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 OR4A15Q8NGL6 344 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 ADAMTS18Q8TE60 1221 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 UCN3Q969E3 161 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 NEUROD4Q9HD90 331 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 SLC6A13Q9NSD5 602 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 TAS2R9Q9NYW1 312 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 C5AR2Q9P296 337 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 VPS4AQ9UN37 437 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 GMEB1Q9Y692 573 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 ANKRD11Q6UB99 2663 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 SPTBP11277 2137 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 PRORSD1PA6NEY8 169 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 DNAJB6O75190 326 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 C6orf47O95873 294 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 GSNP06396 782 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 EFNA1P20827 205 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 NTSP30990 170 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 HBA1P69905 142 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 CEBPEQ15744 281 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 COL28A1Q2UY09 1125 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 PHF19Q5T6S3 580 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 ZNF621Q6ZSS3 439 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 SAMD14Q8IZD0 417 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 TRIML2Q8N7C3 387 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 RCBTB1Q8NDN9 531 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 OR5T3Q8NGG3 340 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 CPPED1Q9BRF8 314 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 NDC1Q9BTX1 674 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 RPF2Q9H7B2 306 aaKnown RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 GIMAP4Q9NUV9 329 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 SIDT1Q9NXL6 827 aaKnown RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 SUCOQ9UBS9 1254 aaKnown RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 ERVK-11Q9UQG0 969 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 ENTPD4Q9Y227 616 aa17.19■□□□□ 0.34
HMGN1-206ENST00000431390 COL27A1Q8IZC6 1860 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-206ENST00000431390 NUP214P35658 2090 aaPredicted RBP17.18■□□□□ 0.34
HMGN1-206ENST00000431390 BLACEA4D250 179 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 GLOD5A6NK44 160 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 MYO1GB0I1T2 1018 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 CYR61O00622 381 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 NVLO15381 856 aaKnown RBP17.18■□□□□ 0.34
HMGN1-206ENST00000431390 PPIBP23284 216 aaKnown RBP17.18■□□□□ 0.34
HMGN1-206ENST00000431390 MANFP55145 182 aaKnown RBP17.18■□□□□ 0.34
HMGN1-206ENST00000431390 MTPNP58546 118 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 CYB5D1Q6P9G0 228 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 RNF148Q8N7C7 305 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 ZFP28Q8NHY6 868 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 CCDC124Q96CT7 223 aaKnown RBP17.18■□□□□ 0.34
HMGN1-206ENST00000431390 CSF3RQ99062 836 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 CCDC86Q9H6F5 360 aaKnown RBP17.18■□□□□ 0.34
HMGN1-206ENST00000431390 SLAMF7Q9NQ25 335 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 PACSIN3Q9UKS6 424 aa17.18■□□□□ 0.34
HMGN1-206ENST00000431390 POMPQ9Y244 141 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms