RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 OR5L2Q8NGL0 311 aa16.35■□□□□ 0.21
NUP50-208ENST00000430547 SREK1Q8WXA9 508 aaKnown RBP16.35■□□□□ 0.21
NUP50-208ENST00000430547 RELTQ969Z4 430 aa16.35■□□□□ 0.21
NUP50-208ENST00000430547 ART5Q96L15 291 aa16.35■□□□□ 0.21
NUP50-208ENST00000430547 PELOQ9BRX2 385 aaKnown RBP16.35■□□□□ 0.21
NUP50-208ENST00000430547 ELOVL6Q9H5J4 265 aa16.35■□□□□ 0.21
NUP50-208ENST00000430547 DDX31Q9H8H2 851 aaKnown RBP16.35■□□□□ 0.21
NUP50-208ENST00000430547 LIN28AQ9H9Z2 209 aaKnown RBP16.35■□□□□ 0.21
NUP50-208ENST00000430547 TIMMDC1Q9NPL8 285 aa16.35■□□□□ 0.21
NUP50-208ENST00000430547 AHSPQ9NZD4 102 aa16.35■□□□□ 0.21
NUP50-208ENST00000430547 PSMC3IPQ9P2W1 217 aaPredicted RBP16.35■□□□□ 0.21
NUP50-208ENST00000430547 MYOTQ9UBF9 498 aa16.35■□□□□ 0.21
NUP50-208ENST00000430547 PPT2Q9UMR5 302 aa16.35■□□□□ 0.21
NUP50-208ENST00000430547 ATG4BQ9Y4P1 393 aa16.35■□□□□ 0.21
NUP50-208ENST00000430547 A0A0A6YYD5 115 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 ARHGAP10A1A4S6 786 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 WWP2O00308 870 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 OR10H2O60403 315 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 SLC19A2O60779 497 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 EEDO75530 441 aaKnown RBP16.34■□□□□ 0.21
NUP50-208ENST00000430547 SEMA3DO95025 777 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 ETHE1O95571 254 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 CLDN1O95832 211 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 RPS17P08708 135 aaKnown RBP16.34■□□□□ 0.21
NUP50-208ENST00000430547 FAM153BP0C7A2 387 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 BSGP35613 385 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 MEOX1P50221 254 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 RNF4P78317 190 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 IGLV3-21P80748 117 aaPredicted RBP16.34■□□□□ 0.21
NUP50-208ENST00000430547 SLC29A2Q14542 456 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 FAM153CQ494X1 144 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 GGTA1PQ4G0N0 100 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 MTFR2Q6P444 385 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 TIFABQ6ZNK6 161 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 PAGE2Q7Z2X7 111 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 ZNF227Q86WZ6 799 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 OR4F6Q8NGB9 312 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 OR8K3Q8NH51 312 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 ZBTB26Q9HCK0 441 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.34■□□□□ 0.21
NUP50-208ENST00000430547 EML6Q6ZMW3 1958 aa16.34■□□□□ 0.21
NUP50-208ENST00000430547 CCL21O00585 134 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 TFECO14948 347 aaPredicted RBP16.33■□□□□ 0.2
NUP50-208ENST00000430547 PROM1O43490 865 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 PEX1O43933 1283 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 PRKRAO75569 313 aaKnown RBP16.33■□□□□ 0.2
NUP50-208ENST00000430547 ALOX15P16050 662 aaPredicted RBP16.33■□□□□ 0.2
NUP50-208ENST00000430547 GCAP28676 217 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 CA7P43166 264 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 HK2P52789 917 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 SGO1Q5FBB7 561 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 IL20RBQ6UXL0 311 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 C16orf47Q6ZP98 133 aaPredicted RBP16.33■□□□□ 0.2
NUP50-208ENST00000430547 RPS27LQ71UM5 84 aaKnown RBP16.33■□□□□ 0.2
NUP50-208ENST00000430547 SULF2Q8IWU5 870 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 GSPT2Q8IYD1 628 aaKnown RBP16.33■□□□□ 0.2
NUP50-208ENST00000430547 ST13P4Q8IZP2 240 aaPredicted RBP16.33■□□□□ 0.2
NUP50-208ENST00000430547 GHDCQ8N2G8 530 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 ZNF321PQ8N8H1 164 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 PSD4Q8NDX1 1056 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 ZNF483Q8TF39 744 aaPredicted RBP16.33■□□□□ 0.2
NUP50-208ENST00000430547 RASL10BQ96S79 203 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 ZNF717Q9BY31 904 aaPredicted RBP16.33■□□□□ 0.2
NUP50-208ENST00000430547 FETUBQ9UGM5 382 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 TBK1Q9UHD2 729 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 SNX6Q9UNH7 406 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 ASB4Q9Y574 426 aa16.33■□□□□ 0.2
NUP50-208ENST00000430547 GLOD5A6NK44 160 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 GOLGA8RI6L899 631 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 ASNA1O43681 348 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 TMPRSS11DO60235 418 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 SUPT7LO94864 414 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 GPR75O95800 540 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 GBAP04062 536 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 ESRRAP11474 423 aaPredicted RBP16.32■□□□□ 0.2
NUP50-208ENST00000430547 ABOP16442 354 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 SOX3P41225 446 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 CDH13P55290 713 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 GPR85P60893 370 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 HERVK_113P63132 956 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 OR52E8Q6IFG1 317 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 MRM1Q6IN84 353 aaKnown RBP16.32■□□□□ 0.2
NUP50-208ENST00000430547 MDGA2Q7Z553 956 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 ACMSDQ8TDX5 336 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 ZNF721Q8TF20 911 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 SELENOMQ8WWX9 145 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 PPWD1Q96BP3 646 aaKnown RBP16.32■□□□□ 0.2
NUP50-208ENST00000430547 SENP5Q96HI0 755 aaPredicted RBP16.32■□□□□ 0.2
NUP50-208ENST00000430547 CNPPD1Q9BV87 410 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 C1QTNF3Q9BXJ4 246 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 ERVK-6Q9BXR3 956 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 MRPL1Q9BYD6 325 aaKnown RBP16.32■□□□□ 0.2
NUP50-208ENST00000430547 NMRK1Q9NWW6 199 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 TMEM216Q9P0N5 145 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 SLC12A4Q9UP95 1085 aa16.32■□□□□ 0.2
NUP50-208ENST00000430547 A0A1W2PR48 441 aa16.31■□□□□ 0.2
NUP50-208ENST00000430547 TMEM200CA6NKL6 621 aa16.31■□□□□ 0.2
NUP50-208ENST00000430547 OR6B1O95007 311 aa16.31■□□□□ 0.2
NUP50-208ENST00000430547 AIFM1O95831 613 aa16.31■□□□□ 0.2
NUP50-208ENST00000430547 SBK3P0C264 359 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms