RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 J3KTA2 159 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 M0R3G1 203 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 RNGTTO60942 597 aaKnown RBP12.99□□□□□ -0.33
THBS3-202ENST00000428962 SERPINB7O75635 380 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 CBLP22681 906 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 PPP2R1BP30154 601 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 GPC1P35052 558 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 TIE1P35590 1138 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 IGFALSP35858 605 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 AHRP35869 848 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 KIR2DL1P43626 348 aaPredicted RBP12.99□□□□□ -0.33
THBS3-202ENST00000428962 GSSP48637 474 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 IDH2P48735 452 aaKnown RBP12.99□□□□□ -0.33
THBS3-202ENST00000428962 KHKP50053 298 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 SEC13P55735 322 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 SMIM11AP58511 58 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 CDC42P60953 191 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 RPS26P62854 115 aaKnown RBP12.99□□□□□ -0.33
THBS3-202ENST00000428962 TP53BP2Q13625 1128 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 UAP1L1Q3KQV9 507 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 RPS26P11Q5JNZ5 115 aaPredicted RBP12.99□□□□□ -0.33
THBS3-202ENST00000428962 NDUFAF5Q5TEU4 345 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 ANKRD54Q6NXT1 300 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 C16orf87Q6PH81 154 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 BHLHB9Q6PI77 547 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 DNAJC22Q8N4W6 341 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 OR9Q2Q8NGE9 314 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 OR52E1Q8NGJ3 308 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 KLK6Q92876 244 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 FAM131CQ96AQ9 280 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 ALPK1Q96QP1 1244 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 C17orf62Q9BQA9 187 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 DPH7Q9BTV6 452 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 ITPAQ9BY32 194 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 TTYH1Q9H313 450 aaPredicted RBP12.99□□□□□ -0.33
THBS3-202ENST00000428962 XKR8Q9H6D3 395 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 PREBQ9HCU5 417 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 MOSPD1Q9UJG1 213 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 TMCC3Q9ULS5 477 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 DUSP12Q9UNI6 340 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 GPSM3Q9Y4H4 160 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 NUMA1Q14980 2115 aa12.99□□□□□ -0.33
THBS3-202ENST00000428962 IGKV1-8A0A0C4DH67 115 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 PRR19A6NJB7 356 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 CLDN24A6NM45 220 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 CLCA1A8K7I4 914 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 LCMT2O60294 686 aaKnown RBP12.98□□□□□ -0.33
THBS3-202ENST00000428962 MAN1A2O60476 641 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 FOXD2O60548 495 aaPredicted RBP12.98□□□□□ -0.33
THBS3-202ENST00000428962 PFDN1O60925 122 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 MFN2O95140 757 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 OXSR1O95747 527 aaPredicted RBP12.98□□□□□ -0.33
THBS3-202ENST00000428962 VIPP01282 170 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 ZNF12P17014 697 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 CMPK1P30085 196 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 PBX2P40425 430 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 BMXP51813 675 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 DGCR6Q14129 220 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 GANABQ14697 944 aaKnown RBP12.98□□□□□ -0.33
THBS3-202ENST00000428962 SLC9A5Q14940 896 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 ZIC1Q15915 447 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 DGUOKQ16854 277 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 CYP27C1Q4G0S4 372 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 ATAT1Q5SQI0 421 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 FAM180BQ6P0A1 224 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 SYCE2Q6PIF2 218 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 KRT73Q86Y46 540 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 AQP11Q8NBQ7 271 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 SRFBP1Q8NEF9 429 aaKnown RBP12.98□□□□□ -0.33
THBS3-202ENST00000428962 UTP15Q8TED0 518 aaKnown RBP12.98□□□□□ -0.33
THBS3-202ENST00000428962 UBE2FQ969M7 185 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 HSPBAP1Q96EW2 488 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 PLEKHA8Q96JA3 519 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 GUCD1Q96NT3 240 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 TEFMQ96QE5 360 aaKnown RBP12.98□□□□□ -0.33
THBS3-202ENST00000428962 RHNO1Q9BSD3 238 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 APOOQ9BUR5 198 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 SLC35C2Q9NQQ7 365 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 SEMA3GQ9NS98 782 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 FKBP14Q9NWM8 211 aa12.98□□□□□ -0.33
THBS3-202ENST00000428962 HMGN4O00479 90 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 PCDH17O14917 1159 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 SLC28A2O43868 658 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 ADAP00813 363 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 FUCA1P04066 466 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 CDK1P06493 297 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 NR4A1P22736 598 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 NTSR1P30989 418 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 BCL6P41182 706 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 TSFMP43897 325 aaKnown RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 ADPRHP54922 357 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 GNA13Q14344 377 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 DUSP7Q16829 419 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 PPP2R2DQ66LE6 453 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 PARM1Q6UWI2 310 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 TMEM64Q6YI46 380 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 Q6ZPB1 254 aaPredicted RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 SLCO6A1Q86UG4 719 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 PLD3Q8IV08 490 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 SLC44A2Q8IWA5 706 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms