RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ZFP36L1Q07352 338 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 TGIF1Q15583 401 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 TMTC4Q5T4D3 741 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 GALNT18Q6P9A2 607 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 ANGPTL8Q6UXH0 198 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 DHDDSQ86SQ9 333 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 PIP4P1Q86T03 277 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 CA13Q8N1Q1 262 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 BMPERQ8N8U9 685 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 GTF2H4Q92759 462 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 GAL3ST3Q96A11 431 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 RTKNQ9BST9 563 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 YIPF3Q9GZM5 350 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SIDT1Q9NXL6 827 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 DAPP1Q9UN19 280 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SATB2Q9UPW6 733 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 PCDHB14Q9Y5E9 798 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 RFPL3O75679 317 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 FESP07332 822 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 CPN2P22792 545 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 PRPH2P23942 346 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 SOX18P35713 384 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 MTTPP55157 894 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 NAA20P61599 178 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 FOLH1Q04609 750 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 PWP1Q13610 501 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 NNATQ16517 81 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 ISXQ2M1V0 245 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 MLIPQ5VWP3 458 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZNF621Q6ZSS3 439 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 LANCL3Q6ZV70 420 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 GPR135Q8IZ08 494 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 FBXW8Q8N3Y1 598 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZNF321PQ8N8H1 164 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 TTC29Q8NA56 475 aaPredicted RBP8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 OR9A2Q8NGT5 310 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 NT5CQ8TCD5 201 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 MAL2Q969L2 176 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 C8orf44Q96CB5 159 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 CCT7Q99832 543 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 TBCDQ9BTW9 1192 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC7A5P2Q9GIP4 190 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 RAB33BQ9H082 229 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 LIN28AQ9H9Z2 209 aaKnown RBP8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 ANKHQ9HCJ1 492 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 EQTNQ9NQ60 294 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 PDP2Q9P2J9 529 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 EGFL7Q9UHF1 273 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 POMPQ9Y244 141 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 NDUFAF1Q9Y375 327 aa8.96□□□□□ -0.97
HMGCLL1-206ENST00000428842 CYR61O00622 381 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 ANGPT2O15123 496 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 POLR1CO15160 346 aaPredicted RBP8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 AHCYL1O43865 530 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 VPS4BO75351 444 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 MYO1DO94832 1006 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 BAG2O95816 211 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 PNLIPP16233 465 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 NCK1P16333 377 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 JAK1P23458 1154 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 ITGA1P56199 1179 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 PHEXP78562 749 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 NFYCQ13952 458 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 MAPKAPK3Q16644 382 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 PDCD4Q53EL6 469 aaKnown RBP8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZC3H12BQ5HYM0 836 aaKnown RBP8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 COX20Q5RI15 118 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 CPTPQ5TA50 214 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 MRM1Q6IN84 353 aaKnown RBP8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 FAM111BQ6SJ93 734 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 DLEU7Q6UYE1 221 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 RBM44Q6ZP01 1051 aaKnown RBP8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 RAB11FIP2Q7L804 512 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 PRSS42Q7Z5A4 293 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 GALNT6Q8NCL4 622 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 OR51Q1Q8NH59 317 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 FCRL1Q96LA6 429 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 CDRT15Q96T59 188 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 DUSP26Q9BV47 211 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 ULBP3Q9BZM4 244 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 TRIM4Q9C037 500 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 NT5DC2Q9H857 520 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC24A3Q9HC58 644 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 PFDN4Q9NQP4 134 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 LOXL2Q9Y4K0 774 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 PCDHGA7Q9Y5G6 932 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 KLK4Q9Y5K2 254 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 V9GYQ6 96 aa8.96□□□□□ -0.98
HMGCLL1-206ENST00000428842 CACNA1AO00555 2505 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 CASQ2O14958 399 aaPredicted RBP8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC22A2O15244 555 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 B3GALT2O43825 422 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 LYNP07948 512 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 CT62P0C5K7 136 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 HSD3B1P14060 373 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 HSD3B2P26439 372 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 PTPN6P29350 595 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 S100A3P33764 101 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 SOAT1P35610 550 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 KIR3DL1P43629 444 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms