RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CLEC2LP0C7M8 214 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 PRKAR1AP10644 381 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 RFX3P48380 749 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 PIK3CGP48736 1102 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 WNT4P56705 351 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ZNF155Q12901 538 aaPredicted RBP4.9□□□□□ -1.62
RIF1-203ENST00000428287 TSTQ16762 297 aaKnown RBP4.9□□□□□ -1.62
RIF1-203ENST00000428287 CLVS2Q5SYC1 327 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 SLC44A3Q8N4M1 653 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 CLRN3Q8NCR9 226 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 OR52P1PQ8NH57 321 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 SETD7Q8WTS6 366 aaKnown RBP4.9□□□□□ -1.62
RIF1-203ENST00000428287 SFXN2Q96NB2 322 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 UTP23Q9BRU9 249 aaKnown RBP4.9□□□□□ -1.62
RIF1-203ENST00000428287 P2RY12Q9H244 342 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 CD93Q9NPY3 652 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ASB6Q9NWX5 421 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 CLEC2DQ9UHP7 191 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ING1Q9UK53 422 aaPredicted RBP4.9□□□□□ -1.62
RIF1-203ENST00000428287 PPT2Q9UMR5 302 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 NDRG2Q9UN36 371 aaKnown RBP4.9□□□□□ -1.62
RIF1-203ENST00000428287 ING4Q9UNL4 249 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 COPS3Q9UNS2 423 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 CA5BQ9Y2D0 317 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 SNX11Q9Y5W9 270 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 BTN3A1O00481 513 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 PTGESO14684 152 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 OR1I1O60431 355 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 SC5DO75845 299 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 HSMCR30P0CW71 290 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 NR2F6P10588 404 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 CPN1P15169 458 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 SOX3P41225 446 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 XCR1P46094 333 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ACSM1Q08AH1 577 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 UGT8Q16880 541 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 LCN1P1Q5VSP4 162 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 HACD4Q5VWC8 232 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 NOTUMQ6P988 496 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ZNF655Q8N720 491 aaPredicted RBP4.9□□□□□ -1.62
RIF1-203ENST00000428287 EEF1AKMT1Q8WVE0 214 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 NMNAT1Q9HAN9 279 aaPredicted RBP4.9□□□□□ -1.62
RIF1-203ENST00000428287 TPT1P8Q9HAU6 139 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ZC4H2Q9NQZ6 224 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 NUDT15Q9NV35 164 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 SCP2D1Q9UJQ7 156 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 CMAHPQ9Y471 501 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 MAB21L2Q9Y586 359 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ATMQ13315 3056 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 TAPBPO15533 448 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 SOD1P00441 154 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 C4BPBP20851 252 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 SOX11P35716 441 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 HMGCS1Q01581 520 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 SEMG2Q02383 582 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ARHGAP1Q07960 439 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 LRRC74AQ0VAA2 488 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ADAM15Q13444 863 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 PDSS1Q5T2R2 415 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 TAC4Q86UU9 113 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 NAXDQ8IW45 347 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 UBTD2Q8WUN7 234 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 IPPKQ9H8X2 491 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 FLRT1Q9NZU1 646 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 G3V3G9 751 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 HCRTO43612 131 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 ADAP00813 363 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 USP17L7P0C7H9 530 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 SLC2A2P11168 524 aaPredicted RBP4.9□□□□□ -1.63
RIF1-203ENST00000428287 ENGP17813 658 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 PCSK1P29120 753 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 GIPRP48546 466 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 DYRK1AQ13627 763 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 SNAPC1Q16533 368 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 NDUFA9Q16795 377 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 ZRANB3Q5FWF4 1079 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 C12orf73Q69YU5 71 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 PDZD3Q86UT5 571 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 OR2T4Q8NH00 348 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 WACQ9BTA9 647 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 EGLN1Q9GZT9 426 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 SPATC1LQ9H0A9 340 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 C11orf49Q9H6J7 331 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 RAD18Q9NS91 495 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 SDHAF2Q9NX18 166 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 OARD1Q9Y530 152 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 IPPQ9Y573 584 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 PCDHB1Q9Y5F3 818 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 COL5A1P20908 1838 aaPredicted RBP4.9□□□□□ -1.63
RIF1-203ENST00000428287 A0A1W2PRQ8 180 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 SHISA3A0PJX4 238 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 FFAR1O14842 300 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 PLOD3O60568 738 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 APOC1P02654 83 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 CD53P19397 219 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 NUP62P37198 522 aaPredicted RBP4.9□□□□□ -1.63
RIF1-203ENST00000428287 CD86P42081 329 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 LHX1P48742 406 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 MTNR1BP49286 362 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 RING1Q06587 406 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms