RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 POLR3GO15318 223 aaPredicted RBP2.89□□□□□ -1.95
LINC01040-201ENST00000425048 LATO43561 262 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 ACTL6AO96019 429 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 PGAM2P15259 253 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 ZNF24P17028 368 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 OR3A3P47888 321 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 RXRGP48443 463 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 MNAT1P51948 309 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 HSP90B2PQ58FF3 399 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 ENPP7Q6UWV6 458 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 RFPL4BQ6ZWI9 263 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 SPATA21Q7Z572 469 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 CAMKVQ8NCB2 501 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 GRK7Q8WTQ7 553 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 C17orf50Q8WW18 174 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 N4BP2L2Q92802 583 aaPredicted RBP2.89□□□□□ -1.95
LINC01040-201ENST00000425048 ELSPBP1Q96BH3 223 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 FAF2Q96CS3 445 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 SPATA33Q96N06 139 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 BARD1Q99728 777 aaKnown RBP2.89□□□□□ -1.95
LINC01040-201ENST00000425048 THUMPD2Q9BTF0 503 aaKnown RBP2.89□□□□□ -1.95
LINC01040-201ENST00000425048 APOL6Q9BWW8 343 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 IQCGQ9H095 443 aaKnown RBP2.89□□□□□ -1.95
LINC01040-201ENST00000425048 CYTL1Q9NRR1 136 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 MRGBPQ9NV56 204 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 ANKRD50Q9ULJ7 1429 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 MAGED1Q9Y5V3 778 aaPredicted RBP2.89□□□□□ -1.95
LINC01040-201ENST00000425048 MBD5Q9P267 1494 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 RPGRIP1LQ68CZ1 1315 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 TUBGCP6Q96RT7 1819 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 PPRC1Q5VV67 1664 aaKnown RBP2.88□□□□□ -1.95
LINC01040-201ENST00000425048 ABCC2Q92887 1545 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 ROCK1Q13464 1354 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 PARD3Q8TEW0 1356 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 KIF15Q9NS87 1388 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 LAMC3Q9Y6N6 1575 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 HFM1A2PYH4 1435 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 A0A1W2PPW3 197 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 H3BQF6 201 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 PANO1I0J062 215 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 PDLIM1O00151 329 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 PES1O00541 588 aaKnown RBP2.88□□□□□ -1.95
LINC01040-201ENST00000425048 TIMM44O43615 452 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 SLU7O95391 586 aaKnown RBP2.88□□□□□ -1.95
LINC01040-201ENST00000425048 FGF19O95750 216 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 MBD3O95983 291 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 PEX19P40855 299 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 TRPC1P48995 793 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 EIF5P55010 431 aaKnown RBP2.88□□□□□ -1.95
LINC01040-201ENST00000425048 CXCL6P80162 114 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 CNTN1Q12860 1018 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 MAPK11Q15759 364 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 GPR141Q7Z602 305 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 CCDC71Q8IV32 467 aaPredicted RBP2.88□□□□□ -1.95
LINC01040-201ENST00000425048 IQCF2Q8IXL9 164 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 SAMD12Q8N8I0 201 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 OR8K1Q8NGG5 319 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 TCP11Q8WWU5 503 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 SLCO4A1Q96BD0 722 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 NTNG2Q96CW9 530 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 RTBDNQ9BSG5 229 aaPredicted RBP2.88□□□□□ -1.95
LINC01040-201ENST00000425048 SCRT1Q9BWW7 348 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 RWDD1Q9H446 243 aaPredicted RBP2.88□□□□□ -1.95
LINC01040-201ENST00000425048 FN3KQ9H479 309 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 DPEP2Q9H4A9 486 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 TMEM165Q9HC07 324 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 ZCCHC17Q9NP64 241 aaKnown RBP2.88□□□□□ -1.95
LINC01040-201ENST00000425048 TRPV5Q9NQA5 729 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 HOMER3Q9NSC5 361 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 UTP6Q9NYH9 597 aaKnown RBP2.88□□□□□ -1.95
LINC01040-201ENST00000425048 CLIC5Q9NZA1 410 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 SENP1Q9P0U3 644 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 ZNF319Q9P2F9 582 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 TRPV2Q9Y5S1 764 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 LAMC1P11047 1609 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 GAPVD1Q14C86 1478 aa2.88□□□□□ -1.95
LINC01040-201ENST00000425048 ANKRD30BQ9BXX2 1392 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 HEG1Q9ULI3 1381 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 REREQ9P2R6 1566 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 AKAP12Q02952 1782 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 ANKRD65E5RJM6 399 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 ANHXE9PGG2 379 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 F8VZ95 297 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 SAP18O00422 153 aaKnown RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 CHUKO15111 745 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 HTATSF1O43719 755 aaKnown RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 AHCYL1O43865 530 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 TADA2AO75478 443 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 FOXH1O75593 365 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 ERLIN2O94905 339 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 SSTR1P30872 391 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 HMGCLP35914 325 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 BACE1P56817 501 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 PAX2Q02962 417 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 SMC1AQ14683 1233 aaKnown RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 PPA1Q15181 289 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 ZNF658BQ4V348 819 aaPredicted RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 ARMCX4Q5H9R4 360 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 GORABQ5T7V8 394 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 WDR78Q5VTH9 848 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms