RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TP53I11O14683 189 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 GNB5O14775 395 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 SMAD9O15198 467 aaKnown RBP5.72□□□□□ -1.49
SDCBP-203ENST00000424270 DYRK3O43781 588 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 PROSCO94903 275 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 SLC16A8O95907 504 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 GOT2P00505 430 aaKnown RBP5.72□□□□□ -1.49
SDCBP-203ENST00000424270 HPNP05981 417 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 THBDP07204 575 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 CSF3P09919 207 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 DANCRP0C864 163 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ZFP36P26651 326 aaKnown RBP5.72□□□□□ -1.49
SDCBP-203ENST00000424270 PSMB4P28070 264 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 SERPINB3P29508 390 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 FOXN2P32314 431 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 NAGLUP54802 743 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 PRAMEP78395 509 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ELAVL1Q15717 326 aaKnown RBP5.72□□□□□ -1.49
SDCBP-203ENST00000424270 CYP1B1Q16678 543 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ELOA3BQ3SY89 546 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.72□□□□□ -1.49
SDCBP-203ENST00000424270 TBCELQ5QJ74 424 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 AGAP6Q5VW22 663 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ADAM5Q6NVV9 412 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 KIAA1328Q86T90 577 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 C17orf64Q86WR6 236 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ZNF610Q8N9Z0 462 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 FAM47BQ8NA70 645 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 MORN4Q8NDC4 146 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ELOA3Q8NG57 546 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 OR14A16Q8NHC5 309 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 RDH11Q8TC12 318 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 PAQR8Q8TEZ7 354 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 PROX1Q92786 737 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 NEUROG1Q92886 237 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 RHBDF1Q96CC6 855 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 RILPQ96NA2 401 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 PPP1R2P1Q96PQ5 205 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 JMJD8Q96S16 334 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 C19orf43Q9BQ61 176 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 PIMREGQ9BSJ6 248 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ZNF747Q9BV97 191 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 CACNG6Q9BXT2 260 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ACTR6Q9GZN1 396 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ARL15Q9NXU5 204 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 LIMA1Q9UHB6 759 aaKnown RBP5.72□□□□□ -1.49
SDCBP-203ENST00000424270 RNF112Q9ULX5 631 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 B3GALT5Q9Y2C3 310 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 C15orf41Q9Y2V0 281 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ZDHHC9Q9Y397 364 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 TENM1Q9UKZ4 2725 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 RAI1Q7Z5J4 1906 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-203ENST00000424270 A0A096LNT2 108 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 CAPN14A8MX76 684 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 E5RI56 91 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 E7ENX8 843 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 MYO1CO00159 1063 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 PRMT5O14744 637 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 CST8O60676 142 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF354AO60765 605 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 NDUFS3O75489 264 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 SNX4O95219 450 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 PLGP00747 810 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 ALDOAP04075 364 aaKnown RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 CRHP06850 196 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 VSIG8P0DPA2 414 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 SKILP12757 684 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 CDH1P12830 882 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 COX7A2P14406 83 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 PECAM1P16284 738 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 TCEA1P23193 301 aaKnown RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 ADRA1AP35348 466 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 PCYT1AP49585 367 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 NEK2P51955 445 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 RPP38P78345 283 aaKnown RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 LGALS3BPQ08380 585 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 GPS1Q13098 491 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 DOC2AQ14183 400 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 FGFBP1Q14512 234 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF791Q3KP31 576 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF672Q499Z4 452 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 FBLN7Q53RD9 439 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 PIGGQ5H8A4 983 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 NHSL2Q5HYW2 709 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 ERICH6BQ5W0A0 696 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 C22orf34Q6ZV56 151 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 UBQLNLQ8IYU4 475 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 DND1Q8IYX4 353 aaKnown RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF321PQ8N8H1 164 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 MFSD9Q8NBP5 474 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 FAM83FQ8NEG4 500 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 SEMA6DQ8NFY4 1073 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 KBTBD8Q8NFY9 601 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 OR1J4Q8NGS1 313 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 OR4L1Q8NH43 312 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 SLC2A12Q8TD20 617 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 C10orf105Q8TEF2 133 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF480Q8WV37 535 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 PYCR2Q96C36 320 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 TM4SF19Q96DZ7 209 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms