RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 OARD1Q9Y530 152 aa13.09□□□□□ -0.31
NFE4-201ENST00000420058 PSAT1Q9Y617 370 aa13.09□□□□□ -0.31
NFE4-201ENST00000420058 CHCHD2Q9Y6H1 151 aaPredicted RBP13.09□□□□□ -0.31
NFE4-201ENST00000420058 MXRA5Q9NR99 2828 aa13.08□□□□□ -0.31
NFE4-201ENST00000420058 SYNDIG1LA6NDD5 238 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 PABPN1LA6NDY0 278 aaKnown RBP13.08□□□□□ -0.32
NFE4-201ENST00000420058 WDR47O94967 919 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 TNNI3P19429 210 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 TACR1P25103 407 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 IVDP26440 423 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 GSTM2P28161 218 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 CDC25BP30305 580 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 TIMP3P35625 211 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 TRPC1P48995 793 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 HNMTP50135 292 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 STX4Q12846 297 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 TSNQ15631 228 aaKnown RBP13.08□□□□□ -0.32
NFE4-201ENST00000420058 ACSF3Q4G176 576 aaPredicted RBP13.08□□□□□ -0.32
NFE4-201ENST00000420058 FAM45BPQ6NSW5 357 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 CHSY3Q70JA7 882 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 OR4N5Q8IXE1 308 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 FBXW8Q8N3Y1 598 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 FAM45AQ8TCE6 357 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 KIAA1191Q96A73 305 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 TIMP4Q99727 224 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 EXO5Q9H790 373 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 LYRM4Q9HD34 91 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 ZNF629Q9UEG4 869 aaPredicted RBP13.08□□□□□ -0.32
NFE4-201ENST00000420058 CNOT11Q9UKZ1 510 aaKnown RBP13.08□□□□□ -0.32
NFE4-201ENST00000420058 CORO1CQ9ULV4 474 aaPredicted RBP13.08□□□□□ -0.32
NFE4-201ENST00000420058 EDARQ9UNE0 448 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 HIVEP2P31629 2446 aa13.08□□□□□ -0.32
NFE4-201ENST00000420058 A0A088AWK7 358 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 ANKDD1BA6NHY2 528 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 AHRRA9YTQ3 701 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 RTCAO00442 366 aaKnown RBP13.07□□□□□ -0.32
NFE4-201ENST00000420058 FGF17O60258 216 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 C1QAP02745 245 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 INHBBP09529 407 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 EPORP19235 508 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 CD53P19397 219 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 ZNF10P21506 573 aaPredicted RBP13.07□□□□□ -0.32
NFE4-201ENST00000420058 ATP5A1P25705 553 aaKnown RBP13.07□□□□□ -0.32
NFE4-201ENST00000420058 GGT5P36269 586 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 TAS2R39P59534 338 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 CRYZQ08257 329 aaKnown RBP13.07□□□□□ -0.32
NFE4-201ENST00000420058 SERTAD2Q14140 314 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 FBXO48Q5FWF7 155 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 PRAMEF20Q5VT98 475 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 TRIM40Q6P9F5 258 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 KRT78Q8N1N4 520 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 TRIM58Q8NG06 486 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 OR10G3Q8NGC4 313 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 DOK4Q8TEW6 326 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 ESAMQ96AP7 390 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 PPWD1Q96BP3 646 aaKnown RBP13.07□□□□□ -0.32
NFE4-201ENST00000420058 SPACA9Q96E40 222 aaPredicted RBP13.07□□□□□ -0.32
NFE4-201ENST00000420058 WDR34Q96EX3 536 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 EGFL8Q99944 293 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 TMEM79Q9BSE2 394 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 PITHD1Q9GZP4 211 aaPredicted RBP13.07□□□□□ -0.32
NFE4-201ENST00000420058 EPB41L4BQ9H329 900 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 EHD1Q9H4M9 534 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 QPCTLQ9NXS2 382 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 JKAMPQ9P055 326 aa13.07□□□□□ -0.32
NFE4-201ENST00000420058 ROS1P08922 2347 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 WASHC1A8K0Z3 465 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 KIAA1324LA8MWY0 1029 aaPredicted RBP13.06□□□□□ -0.32
NFE4-201ENST00000420058 DVL2O14641 736 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 TRIM3O75382 744 aaPredicted RBP13.06□□□□□ -0.32
NFE4-201ENST00000420058 SCELO95171 688 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 LRATO95237 230 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 WISP3O95389 354 aaPredicted RBP13.06□□□□□ -0.32
NFE4-201ENST00000420058 FBXO45P0C2W1 286 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 STT3AP46977 705 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 DUSP8Q13202 625 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 KEAP1Q14145 624 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 DOC2AQ14183 400 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 HP1BP3Q5SSJ5 553 aaPredicted RBP13.06□□□□□ -0.32
NFE4-201ENST00000420058 FNDC7Q5VTL7 733 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 STEAP4Q687X5 459 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 ZC3HC1Q86WB0 502 aaKnown RBP13.06□□□□□ -0.32
NFE4-201ENST00000420058 CXorf67Q86X51 503 aaPredicted RBP13.06□□□□□ -0.32
NFE4-201ENST00000420058 NKAPQ8N5F7 415 aaKnown RBP13.06□□□□□ -0.32
NFE4-201ENST00000420058 SLC15A4Q8N697 577 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 ACOT4Q8N9L9 421 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 NTNG2Q96CW9 530 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 RUNDC3BQ96NL0 473 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 NAT9Q9BTE0 207 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 MCMBPQ9BTE3 642 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 GPRC5BQ9NZH0 403 aa13.06□□□□□ -0.32
NFE4-201ENST00000420058 FOXD3Q9UJU5 478 aaPredicted RBP13.06□□□□□ -0.32
NFE4-201ENST00000420058 TUBAL3A6NHL2 446 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 DNALI1O14645 258 aaPredicted RBP13.05□□□□□ -0.32
NFE4-201ENST00000420058 CLPSP04118 112 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 HRGP04196 525 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 ELK3P41970 407 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 AGFG1P52594 562 aaKnown RBP13.05□□□□□ -0.32
NFE4-201ENST00000420058 KCNJ2P63252 427 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 E2F2Q14209 437 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms