RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 SLAMF1Q13291 335 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 DDX39BQ13838 428 aaKnown RBP8.75□□□□□ -1.01
NUP50-205ENST00000419387 SETDB1Q15047 1291 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 CDSNQ15517 529 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 PFKFB4Q16877 469 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 ZNF750Q32MQ0 723 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 KLC3Q6P597 504 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 C3P1Q6ZMU1 363 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 NCCRP1Q6ZVX7 275 aaPredicted RBP8.75□□□□□ -1.01
NUP50-205ENST00000419387 MYLK4Q86YV6 388 aaPredicted RBP8.75□□□□□ -1.01
NUP50-205ENST00000419387 OR4N5Q8IXE1 308 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 RNF175Q8N4F7 328 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 OR52N2Q8NGI0 321 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 HUS1BQ8NHY5 278 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 FAM57AQ8TBR7 257 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 SLC2A12Q8TD20 617 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 ZNF721Q8TF20 911 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 SREK1Q8WXA9 508 aaKnown RBP8.75□□□□□ -1.01
NUP50-205ENST00000419387 IFT81Q8WYA0 676 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 MTERF1Q99551 399 aaKnown RBP8.75□□□□□ -1.01
NUP50-205ENST00000419387 CENPKQ9BS16 269 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 SORBS1Q9BX66 1292 aaKnown RBP8.75□□□□□ -1.01
NUP50-205ENST00000419387 FUT8Q9BYC5 575 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 EPB41L4BQ9H329 900 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 RPF2Q9H7B2 306 aaKnown RBP8.75□□□□□ -1.01
NUP50-205ENST00000419387 SNX15Q9NRS6 342 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 DEPPQ9NTK1 212 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 MS4A12Q9NXJ0 267 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 NFU1Q9UMS0 254 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 TSC22D4Q9Y3Q8 395 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 PCDHGA11Q9Y5H2 935 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 CRYBG3Q68DQ2 2970 aa8.75□□□□□ -1.01
NUP50-205ENST00000419387 NCOA6Q14686 2063 aaPredicted RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 A0A096LPK6 155 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 LRRC14BA6NHZ5 514 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 H0YIV9 168 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PLPP1O14494 284 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 DYRK3O43781 588 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 FGF17O60258 216 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 KLK8O60259 260 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 UGDHO60701 494 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PDE9AO76083 593 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 TPOP07202 933 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 CNR1P21554 472 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PTX3P26022 381 aaPredicted RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 TYK2P29597 1187 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 TLX1P31314 330 aaPredicted RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 STT3AP46977 705 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 SERPINB8P50452 374 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 RAP1GDS1P52306 607 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 ARFIP1P53367 373 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 RPS13P62277 151 aaKnown RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 PPIAP62937 165 aaKnown RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 PHEXP78562 749 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PLGLB1Q02325 96 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 GTF2H2Q13888 395 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PCBP2Q15366 365 aaKnown RBP eCLIP8.74□□□□□ -1.01
NUP50-205ENST00000419387 UAP1Q16222 522 aaPredicted RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 MPEG1Q2M385 716 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PIGGQ5H8A4 983 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 TMEM211Q6ICI0 200 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 GTF2H2CQ6P1K8 395 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 ARHGAP11AQ6P4F7 1023 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PAOXQ6QHF9 649 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 OPN5Q6U736 354 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 RTL4Q6ZR62 310 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 RGS9BPQ6ZS82 235 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 GDF7Q7Z4P5 450 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 GPR180Q86V85 440 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 CD163Q86VB7 1156 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 ZCCHC7Q8N3Z6 543 aaKnown RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 GOLM1Q8NBJ4 401 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 OR2M7Q8NG81 312 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 TANKQ92844 425 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PPWD1Q96BP3 646 aaKnown RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 REPS1Q96D71 796 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 RBM18Q96H35 190 aaKnown RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 SENP5Q96HI0 755 aaPredicted RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 SCYL1Q96KG9 808 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 SGCZQ96LD1 299 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 GPR78Q96P69 363 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 DGAT2Q96PD7 388 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 DEFB127Q9H1M4 99 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 IPPKQ9H8X2 491 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 ACTR8Q9H981 624 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 DMRT3Q9NQL9 472 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PSD3Q9NYI0 1048 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 NINJ2Q9NZG7 142 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 COPS7AQ9UBW8 275 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PHF11Q9UIL8 331 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PPT2Q9UMR5 302 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 TNPO3Q9Y5L0 923 aaKnown RBP8.74□□□□□ -1.01
NUP50-205ENST00000419387 HRH3Q9Y5N1 445 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PCNX1Q96RV3 2341 aa8.74□□□□□ -1.01
NUP50-205ENST00000419387 PINLYPA6NC86 204 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 FAM166BA8MTA8 275 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 C19orf84I3L1E1 186 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 ACOT7O00154 380 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 FOXE1O00358 373 aaPredicted RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 PROM1O43490 865 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms