RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 WDR48Q8TAF3 677 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 RAET1EQ8TD07 263 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 RASSF5Q8WWW0 418 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 RNF170Q96K19 258 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 DHRS1Q96LJ7 313 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 TEFMQ96QE5 360 aaKnown RBP9.32□□□□□ -0.92
CD44-206ENST00000415148 TMEM246Q9BRR3 403 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 MND1Q9BWT6 205 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 ASPNQ9BXN1 380 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 PRRG3Q9BZD7 231 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 OR2B2Q9GZK3 357 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 SMURF1Q9HCE7 757 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 TRIM39Q9HCM9 518 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 PAQR5Q9NXK6 330 aaPredicted RBP9.32□□□□□ -0.92
CD44-206ENST00000415148 AHSPQ9NZD4 102 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 REV1Q9UBZ9 1251 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 FAAHO00519 579 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 RGS5O15539 181 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 SCO2O43819 266 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 LEFTY1O75610 366 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 TGFB1P01137 390 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 CLEC2LP0C7M8 214 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 ITGB7P26010 798 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 GALK2Q01415 458 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 PUM1Q14671 1186 aaKnown RBP eCLIP9.32□□□□□ -0.92
CD44-206ENST00000415148 SPHARQ15513 63 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 DUSP7Q16829 419 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 CCDC58Q4VC31 144 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 FAM209AQ5JX71 171 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 SAXO2Q658L1 398 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 KIAA0907Q7Z7F0 614 aaPredicted RBP9.32□□□□□ -0.92
CD44-206ENST00000415148 GLCCI1Q86VQ1 547 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 TP53I13Q8NBR0 393 aaPredicted RBP9.32□□□□□ -0.92
CD44-206ENST00000415148 PROKR2Q8NFJ6 384 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 SLC5A11Q8WWX8 675 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 SCLYQ96I15 445 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 IL4I1Q96RQ9 567 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 SLC46A2Q9BY10 475 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 RANGRFQ9HD47 186 aaPredicted RBP9.32□□□□□ -0.92
CD44-206ENST00000415148 EXOSC4Q9NPD3 245 aaKnown RBP9.32□□□□□ -0.92
CD44-206ENST00000415148 CCDC177Q9NQR7 707 aaPredicted RBP9.32□□□□□ -0.92
CD44-206ENST00000415148 STUB1Q9UNE7 303 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 A0A1W2PQ09 198 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 FAM172BPA6NC97 362 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ZNF670-ZNF695F2Z2N8 137 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 TEX28O15482 410 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 LILRB3O75022 631 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ENTPD6O75354 484 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 LRG1P02750 347 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 KLK1P06870 262 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 PDHA2P29803 388 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 NNMTP40261 264 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 CRYBB2P43320 205 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 ATN1P54259 1190 aaPredicted RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 ALDH6A1Q02252 535 aaKnown RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 MXD1Q05195 221 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 UAP1L1Q3KQV9 507 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ZNF805Q5CZA5 627 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ARSIQ5FYB1 569 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 SLC25A30Q5SVS4 291 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 DCST1Q5T197 706 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ZNF517Q6ZMY9 492 aaPredicted RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 ADIPOR2Q86V24 386 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 TMEM25Q86YD3 366 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 GALNT12Q8IXK2 581 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 LRRC56Q8IYG6 542 aaPredicted RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 LILRA3Q8N6C8 439 aaPredicted RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 NANOGP1Q8N7R0 232 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ASCC1Q8N9N2 400 aaKnown RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 OR8J1Q8NGP2 316 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 OR5AK3PQ8NH89 298 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 OR5P2Q8WZ92 322 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ZNF689Q96CS4 500 aaPredicted RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 NEURL3Q96EH8 262 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 HHIPL1Q96JK4 782 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 SNX18Q96RF0 628 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 SLC6A16Q9GZN6 736 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 OR51B5Q9H339 312 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 SNTG1Q9NSN8 517 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 NUFIP1Q9UHK0 495 aaKnown RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 DNMT3AQ9Y6K1 912 aaPredicted RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 PLXND1Q9Y4D7 1925 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 IQCMA0A1B0GVH7 501 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 MEIOCA2RUB1 952 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 NOTOA8MTQ0 251 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 C5orf58C9J3I9 102 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ERVH48-1M5A8F1 160 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 FFAR1O14842 300 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 PI15O43692 258 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 LGI1O95970 557 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 CSF2P04141 144 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 INHAP05111 366 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 TRAPPC2P0DI81 140 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 TRAPPC2BP0DI82 140 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 LAG3P18627 525 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 XPAP23025 273 aaPredicted RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 POU1F1P28069 291 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 SSTR4P31391 388 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms