RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 GTF2H2CQ6P1K8 395 aa14.4□□□□□ -0.1
ACTB-202ENST00000414620 GOLGA7Q7Z5G4 137 aa14.4□□□□□ -0.1
ACTB-202ENST00000414620 PLD6Q8N2A8 252 aaKnown RBP14.4□□□□□ -0.1
ACTB-202ENST00000414620 MARVELD2Q8N4S9 558 aa14.4□□□□□ -0.1
ACTB-202ENST00000414620 RHEBL1Q8TAI7 183 aa14.4□□□□□ -0.1
ACTB-202ENST00000414620 PHF10Q8WUB8 498 aaKnown RBP14.4□□□□□ -0.1
ACTB-202ENST00000414620 RGMAQ96B86 450 aa14.4□□□□□ -0.1
ACTB-202ENST00000414620 VKORC1Q9BQB6 163 aa14.4□□□□□ -0.1
ACTB-202ENST00000414620 TTTY12Q9BZ98 90 aa14.4□□□□□ -0.1
ACTB-202ENST00000414620 RPF2Q9H7B2 306 aaKnown RBP14.4□□□□□ -0.1
ACTB-202ENST00000414620 COPS7AQ9UBW8 275 aa14.4□□□□□ -0.1
ACTB-202ENST00000414620 HRH3Q9Y5N1 445 aa14.4□□□□□ -0.1
ACTB-202ENST00000414620 LIPGQ9Y5X9 500 aa14.4□□□□□ -0.1
ACTB-202ENST00000414620 ACOT7O00154 380 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 KLHL2O95198 593 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 ALDOAP04075 364 aaKnown RBP14.39□□□□□ -0.11
ACTB-202ENST00000414620 COX7A2P14406 83 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 TYK2P29597 1187 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 PHBP35232 272 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 KIR3DL1P43629 444 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 STT3AP46977 705 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 DNASE1L1P49184 302 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 ALDH18A1P54886 795 aaKnown RBP14.39□□□□□ -0.11
ACTB-202ENST00000414620 PHEXP78562 749 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 IGLV3-21P80748 117 aaPredicted RBP14.39□□□□□ -0.11
ACTB-202ENST00000414620 ASPHQ12797 758 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 ACAP2Q15057 778 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 TECRLQ5HYJ1 363 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 LIPJQ5W064 366 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 KLC3Q6P597 504 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 RTL4Q6ZR62 310 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 CEP128Q6ZU80 1094 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 GPR180Q86V85 440 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 C9orf40Q8IXQ3 194 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 EID3Q8N140 333 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 RPRMLQ8N4K4 120 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 OR5L2Q8NGL0 311 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 C16orf45Q96MC5 204 aaPredicted RBP14.39□□□□□ -0.11
ACTB-202ENST00000414620 CDK15Q96Q40 435 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 CENPKQ9BS16 269 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 CNPPD1Q9BV87 410 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 TRIM8Q9BZR9 551 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 ZNF358Q9NW07 568 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 ADGRE2Q9UHX3 823 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 PHF11Q9UIL8 331 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 RNF11Q9Y3C5 154 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 ATG4BQ9Y4P1 393 aa14.39□□□□□ -0.11
ACTB-202ENST00000414620 CENPEQ02224 2701 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 GLOD5A6NK44 160 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 WASHC1A8K0Z3 465 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 TMPRSS11DO60235 418 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 EEDO75530 441 aaKnown RBP14.38□□□□□ -0.11
ACTB-202ENST00000414620 URI1O94763 535 aaPredicted RBP14.38□□□□□ -0.11
ACTB-202ENST00000414620 ACSL3O95573 720 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 CCL3P10147 92 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 PIK3CBP42338 1070 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 NEK2P51955 445 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 HERVK_113P63132 956 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 ERVK-8P63133 956 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 PLIN5Q00G26 463 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 PCDH1Q08174 1060 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 ARHGAP11AQ6P4F7 1023 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 FAM47EQ6ZV65 393 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 CCDC91Q7Z6B0 441 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 ZCCHC7Q8N3Z6 543 aaKnown RBP14.38□□□□□ -0.11
ACTB-202ENST00000414620 PTGR2Q8N8N7 351 aaPredicted RBP14.38□□□□□ -0.11
ACTB-202ENST00000414620 OR8K3Q8NH51 312 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 CA5BP1Q8WTZ4 195 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 UCN3Q969E3 161 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 GPR78Q96P69 363 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 GAL3ST4Q96RP7 486 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 ERVK-6Q9BXR3 956 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 ZNF717Q9BY31 904 aaPredicted RBP14.38□□□□□ -0.11
ACTB-202ENST00000414620 CDC42EP4Q9H3Q1 356 aaKnown RBP14.38□□□□□ -0.11
ACTB-202ENST00000414620 ACSS3Q9H6R3 686 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 IPPKQ9H8X2 491 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 PLSCR2Q9NRY7 297 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 COQ3Q9NZJ6 369 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 ERVK-19Q9WJR5 959 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 PCDHGA11Q9Y5H2 935 aa14.38□□□□□ -0.11
ACTB-202ENST00000414620 A0A0A6YYD5 115 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 FAM90A27PA6NNH2 459 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 NPIPA2E9PIF3 369 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 NPIPA3F8WFD2 350 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 KLK8O60259 260 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 GBAP04062 536 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 P04436 131 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 NR2F6P10588 404 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 ALOX15P16050 662 aaPredicted RBP14.37□□□□□ -0.11
ACTB-202ENST00000414620 CNR1P21554 472 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 TLX1P31314 330 aaPredicted RBP14.37□□□□□ -0.11
ACTB-202ENST00000414620 BUD31P41223 144 aaPredicted RBP14.37□□□□□ -0.11
ACTB-202ENST00000414620 MAGEA5P43359 124 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 PCBP2Q15366 365 aaKnown RBP eCLIP14.37□□□□□ -0.111e-7■■■■□ 20.3
ACTB-202ENST00000414620 OPN5Q6U736 354 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 CYP20A1Q6UW02 462 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 GK5Q6ZS86 529 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 SLC22A16Q86VW1 577 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 ZNF295-AS1Q8N0V1 137 aa14.37□□□□□ -0.11
ACTB-202ENST00000414620 TMEM251Q8N6I4 163 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms