RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CELF2O95319 508 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PPBPP02775 128 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 LCKP06239 509 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 LPLP06858 475 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 HCKP08631 526 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SLC2A1P11166 492 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 DBTP11182 482 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 RNH1P13489 461 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PFKFB1P16118 471 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CTPS1P17812 591 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TCP1P17987 556 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 UGT1A6P19224 532 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 RAB3AP20336 220 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 GSTM3P21266 225 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 UBA1P22314 1058 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ME2P23368 584 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CXCR2P25025 360 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ELAVL4P26378 380 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 KLRC1P26715 233 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 IL1R2P27930 398 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 HTR2AP28223 471 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 EPHB2P29323 1055 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 EPHX2P34913 555 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 GPX4P36969 197 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 BTDP43251 543 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MMP15P51511 669 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 UFM1P61960 85 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 RBX1P62877 108 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ELF3P78545 371 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 GALK2Q01415 458 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TNFRSF9Q07011 255 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MZT1Q08AG7 82 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PMPCAQ10713 525 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TGFBIQ15582 683 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 KCNJ8Q15842 424 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 DUSP7Q16829 419 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 EXOC3L4Q17RC7 722 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ATP13A5Q4VNC0 1218 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 AKIRIN2Q53H80 203 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SLC25A53Q5H9E4 307 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CBWD5Q5RIA9 395 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MFSD14BQ5SR56 506 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PRAMEF19Q5SWL8 479 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF691Q5VV52 312 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SEL1L3Q68CR1 1132 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ADNP2Q6IQ32 1131 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 EFCAB12Q6NXP0 572 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SLC27A1Q6PCB7 646 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 KIAA1324Q6UXG2 1013 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 DLEU7Q6UYE1 221 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 GDPD4Q6W3E5 623 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CCNI2Q6ZMN8 369 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 Q6ZPB1 254 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SSX9Q7RTT3 188 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 HDDC2Q7Z4H3 204 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TECPR1Q7Z6L1 1165 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PATL1Q86TB9 770 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 AACSQ86V21 672 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ZBED8Q8IZ13 594 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 GTPBP8Q8N3Z3 284 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MREGQ8N565 214 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF561Q8N587 486 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 BCORP1Q8N888 145 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 DCBLD1Q8N8Z6 715 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CCDC71LQ8N9Z2 235 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CNBD1Q8NA66 436 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CCDC197Q8NCU1 140 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 OR5B17Q8NGF7 314 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 KCNG3Q8TAE7 436 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ACTRT1Q8TDG2 376 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 NEK7Q8TDX7 302 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 FAM222BQ8WU58 562 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PTPMT1Q8WUK0 201 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CLEC4DQ8WXI8 215 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SMPDL3BQ92485 455 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 EMG1Q92979 244 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SLC38A4Q969I6 547 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ASB9Q96DX5 294 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 RRNAD1Q96FB5 475 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CERS2Q96G23 380 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM80Q96HE8 168 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF668Q96K58 619 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 FAM210BQ96KR6 192 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MRGPRX4Q96LA9 322 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF597Q96LX8 424 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 GLT1D1Q96MS3 346 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF570Q96NI8 536 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF285Q96NJ3 590 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 DUX5Q96PT3 197 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TGS1Q96RS0 853 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CDCA3Q99618 268 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 NEURL2Q9BR09 285 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PCGF1Q9BSM1 259 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM43Q9BTV4 400 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 HIPK2Q9H2X6 1198 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 OR51M1Q9H341 326 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MTG2Q9H4K7 406 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 RNF41Q9H4P4 317 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PRDM12Q9H4Q4 367 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms