RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CEACAM8P31997 349 aaPredicted RBP8.81□□□□□ -1
RFFL-203ENST00000413582 WNT3P56703 355 aa8.81□□□□□ -1
RFFL-203ENST00000413582 HSD17B7P56937 341 aa8.81□□□□□ -1
RFFL-203ENST00000413582 RAB38P57729 211 aa8.81□□□□□ -1
RFFL-203ENST00000413582 NKX6-1P78426 367 aaPredicted RBP8.81□□□□□ -1
RFFL-203ENST00000413582 SORDQ00796 357 aa8.81□□□□□ -1
RFFL-203ENST00000413582 PDIA2Q13087 525 aaKnown RBP8.81□□□□□ -1
RFFL-203ENST00000413582 SLC13A2Q13183 592 aa8.81□□□□□ -1
RFFL-203ENST00000413582 THOC5Q13769 683 aaKnown RBP8.81□□□□□ -1
RFFL-203ENST00000413582 RUNX2Q13950 521 aa8.81□□□□□ -1
RFFL-203ENST00000413582 FRG1Q14331 258 aaKnown RBP8.81□□□□□ -1
RFFL-203ENST00000413582 ELAVL1Q15717 326 aaKnown RBP8.81□□□□□ -1
RFFL-203ENST00000413582 BBS9Q3SYG4 887 aa8.81□□□□□ -1
RFFL-203ENST00000413582 ACSF3Q4G176 576 aaPredicted RBP8.81□□□□□ -1
RFFL-203ENST00000413582 TOR1AIP1Q5JTV8 583 aa8.81□□□□□ -1
RFFL-203ENST00000413582 Q5PR19 223 aa8.81□□□□□ -1
RFFL-203ENST00000413582 CASC4Q6P4E1 433 aa8.81□□□□□ -1
RFFL-203ENST00000413582 ADGRD1Q6QNK2 874 aa8.81□□□□□ -1
RFFL-203ENST00000413582 HSDL2Q6YN16 418 aa8.81□□□□□ -1
RFFL-203ENST00000413582 CLNKQ7Z7G1 428 aa8.81□□□□□ -1
RFFL-203ENST00000413582 CROCCP2Q86T23 111 aa8.81□□□□□ -1
RFFL-203ENST00000413582 CIARTQ8N365 385 aaPredicted RBP8.81□□□□□ -1
RFFL-203ENST00000413582 FAM47BQ8NA70 645 aa8.81□□□□□ -1
RFFL-203ENST00000413582 TRPV3Q8NET8 790 aa8.81□□□□□ -1
RFFL-203ENST00000413582 TNIP2Q8NFZ5 429 aa8.81□□□□□ -1
RFFL-203ENST00000413582 LINC01560Q8TB33 94 aa8.81□□□□□ -1
RFFL-203ENST00000413582 PYROXD1Q8WU10 500 aa8.81□□□□□ -1
RFFL-203ENST00000413582 SLC5A11Q8WWX8 675 aa8.81□□□□□ -1
RFFL-203ENST00000413582 LRRC46Q96FV0 321 aa8.81□□□□□ -1
RFFL-203ENST00000413582 SGCZQ96LD1 299 aa8.81□□□□□ -1
RFFL-203ENST00000413582 TSNARE1Q96NA8 513 aa8.81□□□□□ -1
RFFL-203ENST00000413582 FUT8Q9BYC5 575 aa8.81□□□□□ -1
RFFL-203ENST00000413582 SLC6A15Q9H2J7 730 aa8.81□□□□□ -1
RFFL-203ENST00000413582 EXO5Q9H790 373 aa8.81□□□□□ -1
RFFL-203ENST00000413582 PPCSQ9HAB8 311 aa8.81□□□□□ -1
RFFL-203ENST00000413582 SH2D2AQ9NP31 389 aa8.81□□□□□ -1
RFFL-203ENST00000413582 SAYSD1Q9NPB0 183 aa8.81□□□□□ -1
RFFL-203ENST00000413582 PRTFDC1Q9NRG1 225 aa8.81□□□□□ -1
RFFL-203ENST00000413582 ARL15Q9NXU5 204 aa8.81□□□□□ -1
RFFL-203ENST00000413582 TEX264Q9Y6I9 313 aa8.81□□□□□ -1
RFFL-203ENST00000413582 NBEAL1Q6ZS30 2694 aa8.8□□□□□ -1
RFFL-203ENST00000413582 ROS1P08922 2347 aa8.8□□□□□ -1
RFFL-203ENST00000413582 A0A0G2JN53 185 aa8.8□□□□□ -1
RFFL-203ENST00000413582 H7C1Q1 480 aa8.8□□□□□ -1
RFFL-203ENST00000413582 RIPK2O43353 540 aa8.8□□□□□ -1
RFFL-203ENST00000413582 HAUS5O94927 633 aa8.8□□□□□ -1
RFFL-203ENST00000413582 P04436 131 aa8.8□□□□□ -1
RFFL-203ENST00000413582 NUDT17P0C025 328 aa8.8□□□□□ -1
RFFL-203ENST00000413582 RFPL3SP0C7P2 107 aa8.8□□□□□ -1
RFFL-203ENST00000413582 PHBP35232 272 aa8.8□□□□□ -1
RFFL-203ENST00000413582 PIGAP37287 484 aa8.8□□□□□ -1
RFFL-203ENST00000413582 RGS4P49798 205 aa8.8□□□□□ -1
RFFL-203ENST00000413582 ZNF136P52737 540 aa8.8□□□□□ -1
RFFL-203ENST00000413582 AP1S2P56377 157 aa8.8□□□□□ -1
RFFL-203ENST00000413582 BTN3A2P78410 334 aa8.8□□□□□ -1
RFFL-203ENST00000413582 BMPR2Q13873 1038 aa8.8□□□□□ -1
RFFL-203ENST00000413582 CSHL1Q14406 222 aa8.8□□□□□ -1
RFFL-203ENST00000413582 CASP8Q14790 479 aa8.8□□□□□ -1
RFFL-203ENST00000413582 UGT3A1Q6NUS8 523 aa8.8□□□□□ -1
RFFL-203ENST00000413582 PAQR3Q6TCH7 311 aa8.8□□□□□ -1
RFFL-203ENST00000413582 OPN5Q6U736 354 aa8.8□□□□□ -1
RFFL-203ENST00000413582 LRIG3Q6UXM1 1119 aa8.8□□□□□ -1
RFFL-203ENST00000413582 TMPRSS11BQ86T26 416 aa8.8□□□□□ -1
RFFL-203ENST00000413582 CCDC25Q86WR0 208 aa8.8□□□□□ -1
RFFL-203ENST00000413582 KIF18BQ86Y91 864 aa8.8□□□□□ -1
RFFL-203ENST00000413582 IGDCC3Q8IVU1 814 aa8.8□□□□□ -1
RFFL-203ENST00000413582 PALM2Q8IXS6 379 aa8.8□□□□□ -1
RFFL-203ENST00000413582 GSPT2Q8IYD1 628 aaKnown RBP8.8□□□□□ -1
RFFL-203ENST00000413582 ZBED8Q8IZ13 594 aa8.8□□□□□ -1
RFFL-203ENST00000413582 MYO1HQ8N1T3 1032 aa8.8□□□□□ -1
RFFL-203ENST00000413582 VWA5B2Q8N398 1253 aa8.8□□□□□ -1
RFFL-203ENST00000413582 TMEM132CQ8N3T6 1108 aa8.8□□□□□ -1
RFFL-203ENST00000413582 ZNF321PQ8N8H1 164 aa8.8□□□□□ -1
RFFL-203ENST00000413582 OR8K3Q8NH51 312 aa8.8□□□□□ -1
RFFL-203ENST00000413582 OR14A16Q8NHC5 309 aa8.8□□□□□ -1
RFFL-203ENST00000413582 NEIL3Q8TAT5 605 aa8.8□□□□□ -1
RFFL-203ENST00000413582 PTPMT1Q8WUK0 201 aaPredicted RBP8.8□□□□□ -1
RFFL-203ENST00000413582 DAZLQ92904 295 aaKnown RBP8.8□□□□□ -1
RFFL-203ENST00000413582 GAL3ST3Q96A11 431 aa8.8□□□□□ -1
RFFL-203ENST00000413582 FBXL8Q96CD0 374 aa8.8□□□□□ -1
RFFL-203ENST00000413582 LINGO1Q96FE5 620 aa8.8□□□□□ -1
RFFL-203ENST00000413582 CSF3RQ99062 836 aa8.8□□□□□ -1
RFFL-203ENST00000413582 NDNQ99608 321 aa8.8□□□□□ -1
RFFL-203ENST00000413582 AIF1LQ9BQI0 150 aa8.8□□□□□ -1
RFFL-203ENST00000413582 ACBD3Q9H3P7 528 aa8.8□□□□□ -1
RFFL-203ENST00000413582 CDC42EP4Q9H3Q1 356 aaKnown RBP8.8□□□□□ -1
RFFL-203ENST00000413582 PELI2Q9HAT8 420 aa8.8□□□□□ -1
RFFL-203ENST00000413582 PLAC1Q9HBJ0 212 aa8.8□□□□□ -1
RFFL-203ENST00000413582 ZNF629Q9UEG4 869 aaPredicted RBP8.8□□□□□ -1
RFFL-203ENST00000413582 FETUBQ9UGM5 382 aa8.8□□□□□ -1
RFFL-203ENST00000413582 ADAM21Q9UKJ8 722 aa8.8□□□□□ -1
RFFL-203ENST00000413582 FBXO5Q9UKT4 447 aa8.8□□□□□ -1
RFFL-203ENST00000413582 MAD1L1Q9Y6D9 718 aa8.8□□□□□ -1
RFFL-203ENST00000413582 CLCA3PQ9Y6N3 262 aa8.8□□□□□ -1
RFFL-203ENST00000413582 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.8□□□□□ -1
RFFL-203ENST00000413582 CHD3Q12873 2000 aaKnown RBP8.8□□□□□ -1
RFFL-203ENST00000413582 A0A087WUV0 522 aaPredicted RBP8.79□□□□□ -1
RFFL-203ENST00000413582 SYNDIG1LA6NDD5 238 aa8.79□□□□□ -1
RFFL-203ENST00000413582 CYR61O00622 381 aa8.79□□□□□ -1
RFFL-203ENST00000413582 CLDN4O14493 209 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms