RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 FOLH1Q04609 750 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TAF10Q12962 218 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TSTA3Q13630 321 aaPredicted RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 RPS6KA1Q15418 735 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 STXBP2Q15833 593 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CDC37Q16543 378 aaPredicted RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 UGP2Q16851 508 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ZNF528Q3MIS6 628 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 XKR6Q5GH73 641 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 C1QTNF12Q5T7M4 302 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 BSPRYQ5W0U4 402 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SNRNP48Q6IEG0 339 aaKnown RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 UGT3A1Q6NUS8 523 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ARMCX2Q7L311 632 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SLC16A9Q7RTY1 509 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 PIWIL3Q7Z3Z3 882 aaKnown RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 PIGWQ7Z7B1 504 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CUZD1Q86UP6 607 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 NR2C2APQ86WQ0 139 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SNX32Q86XE0 403 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 KLHDC8AQ8IYD2 350 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 KBTBD3Q8NAB2 608 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TMEM178AQ8NBL3 297 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SLC37A3Q8NCC5 494 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ZNF248Q8NDW4 579 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DDHD1Q8NEL9 900 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 OR5AP2Q8NGF4 316 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SEPT8Q92599 483 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SNRNP40Q96DI7 357 aaKnown RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GDAP1L1Q96MZ0 367 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 F2RL3Q96RI0 385 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 USP28Q96RU2 1077 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 NAP1L3Q99457 506 aaPredicted RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 PKP4Q99569 1192 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ASCL2Q99929 193 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SLC2A11Q9BYW1 496 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 PUS3Q9BZE2 481 aaKnown RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ZNF350Q9GZX5 532 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CUEDC2Q9H467 287 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MARCH7Q9H992 704 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SLC38A10Q9HBR0 1119 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DNAJC4Q9NNZ3 241 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 A4GALTQ9NPC4 353 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SIX2Q9NPC8 291 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 IARS2Q9NSE4 1012 aaKnown RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TBC1D13Q9NVG8 400 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CHCHD3Q9NX63 227 aaKnown RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 AATFQ9NY61 560 aaKnown RBP eCLIP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SPG21Q9NZD8 308 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 NYAP2Q9P242 653 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DNAJB9Q9UBS3 223 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FBXL4Q9UKA2 621 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GPR132Q9UNW8 380 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 WDR37Q9Y2I8 494 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CACNA1GO43497 2377 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DNAH14Q0VDD8 3507 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FLNBO75369 2602 aaKnown RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ASH1LQ9NR48 2969 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TPRP12270 2363 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FAM208BQ5VWN6 2430 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 NCOR2Q9Y618 2525 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 KMT2BQ9UMN6 2715 aaPredicted RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 OTOFQ9HC10 1997 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 A0A087WW49 117 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 A4D1N5 150 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TRIM64A6NGJ6 449 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TRIM64BA6NI03 449 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 A8MVM7 634 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CCSO14618 274 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CTDSPLO15194 276 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 LINC01565O15544 149 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TTI1O43156 1089 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MBTPS2O43462 519 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 EDIL3O43854 480 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SELENOFO60613 162 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CYTIPO60759 359 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FMO6PO60774 539 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 KINO60870 393 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MTRF1O75570 445 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TRMUO75648 421 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 STAM2O75886 525 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DDHD2O94830 711 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SEC24AO95486 1093 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SNAI1O95863 264 aaPredicted RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SLC16A8O95907 504 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 PAK4O96013 591 aaPredicted RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TSHBP01222 138 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MMP1P03956 469 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 PCP11498 1178 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 PLA2G2AP14555 144 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 IL9P15248 144 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 RPL35AP18077 110 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 RBMS1P29558 406 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 STIP1P31948 543 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 RDXP35241 583 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 NUMBP49757 651 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 NR0B1P51843 470 aaKnown RBP2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CASP9P55211 416 aa2.31□□□□□ -2.04
RNU6-1140P-201ENST00000410517 KCNK10P57789 538 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms