RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 PRKRAO75569 313 aaKnown RBP19.07■□□□□ 0.64
USP39-204ENST00000409766 SEC14L2O76054 403 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 ANGPTL1O95841 491 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 BCHEP06276 602 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 SPIBQ01892 262 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 MAPK11Q15759 364 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 RPS26P11Q5JNZ5 115 aaPredicted RBP19.07■□□□□ 0.64
USP39-204ENST00000409766 GPR107Q5VW38 600 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 BPIFB6Q8NFQ5 453 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 RAB8BQ92930 207 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 TMEM19Q96HH6 336 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 FEVQ99581 238 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 ATG4BQ9Y4P1 393 aa19.07■□□□□ 0.64
USP39-204ENST00000409766 FANCMQ8IYD8 2048 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 A0A1W2PR48 441 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 SHISA7A6NL88 538 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 C5orf58C9J3I9 102 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 BTN3A3O00478 584 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 SLC19A1P41440 591 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 CDH12P55289 794 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 PIGFQ07326 219 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 CCINQ13939 588 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 B3GNT8Q7Z7M8 397 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 PAQR7Q86WK9 346 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 CCDC71Q8IV32 467 aaPredicted RBP19.06■□□□□ 0.64
USP39-204ENST00000409766 SERHL2Q9H4I8 314 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 APOBEC3BQ9UH17 382 aaKnown RBP19.06■□□□□ 0.64
USP39-204ENST00000409766 MMP17Q9ULZ9 603 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 ZNF451Q9Y4E5 1061 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 MTCH2Q9Y6C9 303 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 ENPP4Q9Y6X5 453 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 DNAH14Q0VDD8 3507 aa19.06■□□□□ 0.64
USP39-204ENST00000409766 GLOD5A6NK44 160 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 PTGES3LE9PB15 166 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 J3KTA2 159 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 AXIN1O15169 862 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 XPNPEP2O43895 674 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 RASGRP1O95267 797 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 CD72P21854 359 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 TSFMP43897 325 aaKnown RBP19.05■□□□□ 0.64
USP39-204ENST00000409766 SRP54P61011 504 aaKnown RBP19.05■□□□□ 0.64
USP39-204ENST00000409766 CXCR4P61073 352 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 YPEL5P62699 121 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 RPP38P78345 283 aaKnown RBP19.05■□□□□ 0.64
USP39-204ENST00000409766 TP53BP2Q13625 1128 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 FBXO43Q4G163 708 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 GTF2IRD2BQ6EKJ0 949 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 ZNF605Q86T29 641 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 GTF2IRD2Q86UP8 949 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 SLC5A8Q8N695 610 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 SRFBP1Q8NEF9 429 aaKnown RBP19.05■□□□□ 0.64
USP39-204ENST00000409766 OR10G2Q8NGC3 310 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 OR52J3Q8NH60 311 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 APOBEC4Q8WW27 367 aaKnown RBP19.05■□□□□ 0.64
USP39-204ENST00000409766 PIP5K1AQ99755 562 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 TWSG1Q9GZX9 223 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 SRMSQ9H3Y6 488 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 ACER3Q9NUN7 267 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 TNRC18O15417 2968 aaPredicted RBP19.05■□□□□ 0.64
USP39-204ENST00000409766 LRP4O75096 1905 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 TRBV23OR9-2A0A075B6M9 112 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 C10orf142B7Z368 130 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 H3BMQ9 156 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 PGRMC2O15173 223 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 GUCY1B2O75343 617 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 JUNDP17535 347 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 LIMS1P48059 325 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 HMGA2P52926 109 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 TUBA3CQ13748 450 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 PUM1Q14671 1186 aaKnown RBP eCLIP19.05■□□□□ 0.64
USP39-204ENST00000409766 MICAQ29983 383 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 EXOC3L2Q2M3D2 409 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 ALG11Q2TAA5 492 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 LAIR1Q6GTX8 287 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 HRASLS5Q96KN8 279 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 COG8Q96MW5 612 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 NODALQ96S42 347 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 RSPO3Q9BXY4 272 aaPredicted RBP19.05■□□□□ 0.64
USP39-204ENST00000409766 LHPPQ9H008 270 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 ZSCAN32Q9NX65 697 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 AASSQ9UDR5 926 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 PCDHGA2Q9Y5H1 932 aa19.05■□□□□ 0.64
USP39-204ENST00000409766 ARHGEF17Q96PE2 2063 aaPredicted RBP19.04■□□□□ 0.64
USP39-204ENST00000409766 SH3BP5O60239 455 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 MFN2O95140 757 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 F3P13726 295 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 CD247P20963 164 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 MATN1P21941 496 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 CERS1P27544 350 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 AKT2P31751 481 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 NCBP2P52298 156 aaKnown RBP eCLIP19.04■□□□□ 0.643e-6■■□□□ 12.2
USP39-204ENST00000409766 RAB8AP61006 207 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 KCNC4Q03721 635 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 MAD2L1BPQ15013 274 aaPredicted RBP19.04■□□□□ 0.64
USP39-204ENST00000409766 TJAP1Q5JTD0 557 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 NRROSQ86YC3 692 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 SLC44A2Q8IWA5 706 aaPredicted RBP19.04■□□□□ 0.64
USP39-204ENST00000409766 FLVCR1-AS1Q8TAF5 88 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 SLC22A18Q96BI1 424 aa19.04■□□□□ 0.64
USP39-204ENST00000409766 NAA50Q9GZZ1 169 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms