RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ZIM3Q96PE6 472 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 RANBP9Q96S59 729 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 MLPHQ9BV36 600 aaPredicted RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 ZCCHC17Q9NP64 241 aaKnown RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 EIF3KQ9UBQ5 218 aaKnown RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 DNAJB9Q9UBS3 223 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 FBXL5Q9UKA1 691 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 CDH7Q9ULB5 785 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 FAM168BA1KXE4 195 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 NME6O75414 186 aaPredicted RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 CRCPO75575 148 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 GLCEO94923 617 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 HSD17B1P14061 328 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 OR1D2P34982 312 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 HMGCLP35914 325 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 FRKP42685 505 aaPredicted RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 NDPQ00604 133 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 POU5F1Q01860 360 aaKnown RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 BFSP1Q12934 665 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 SPHARQ15513 63 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 LTB4RQ15722 352 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 PRR30Q53SZ7 412 aaPredicted RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 CCDC158Q5M9N0 1113 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 DCAF12Q5T6F0 453 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 OLFML2AQ68BL7 652 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 GALNTL5Q7Z4T8 443 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 KLHDC8AQ8IYD2 350 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 SLC22A18ASQ8N1D0 253 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 THEM5Q8N1Q8 247 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 OR1K1Q8NGR3 316 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 ULK4Q96C45 1275 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 AP2M1Q96CW1 435 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 C16orf58Q96GQ5 468 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 RAB40CQ96S21 281 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 ZBP1Q9H171 429 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 ITM2BQ9Y287 266 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 ACEP12821 1306 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 ZSCAN5CA6NGD5 496 aaPredicted RBP3.03□□□□□ -1.92
PMS1-203ENST00000409593 LY6G6DO95868 133 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 IGHG3P01860 377 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 FCGR3AP08637 254 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 CALML3P27482 149 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 CHRNA3P32297 505 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 LYZP61626 148 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 SLC34A1Q06495 639 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 ARHGAP1Q07960 439 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 RSBN1Q5VWQ0 802 aaPredicted RBP3.03□□□□□ -1.92
PMS1-203ENST00000409593 ABRAXAS1Q6UWZ7 409 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 CYP4V2Q6ZWL3 525 aaPredicted RBP3.03□□□□□ -1.92
PMS1-203ENST00000409593 SLC34A3Q8N130 599 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 ZBED6CLQ96FA7 236 aaPredicted RBP3.03□□□□□ -1.92
PMS1-203ENST00000409593 PPP1R16AQ96I34 528 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 UTP14AQ9BVJ6 771 aaKnown RBP3.03□□□□□ -1.92
PMS1-203ENST00000409593 YTHDF1Q9BYJ9 559 aaKnown RBP3.03□□□□□ -1.92
PMS1-203ENST00000409593 DPEP3Q9H4B8 488 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 ELL3Q9HB65 397 aaPredicted RBP3.03□□□□□ -1.92
PMS1-203ENST00000409593 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.03□□□□□ -1.92
PMS1-203ENST00000409593 ZNF256Q9Y2P7 627 aaPredicted RBP3.03□□□□□ -1.92
PMS1-203ENST00000409593 KIF25-AS1Q9Y6Z4 181 aa3.03□□□□□ -1.92
PMS1-203ENST00000409593 ATP6AP2A0A1C7CYW4 349 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 SDR42E2A6NKP2 422 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 CSDE1O75534 798 aaKnown RBP3.02□□□□□ -1.93
PMS1-203ENST00000409593 SLC16A8O95907 504 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 CPA3P15088 417 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 FOSL2P15408 326 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 GPX3P22352 226 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 GLRA1P23415 457 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 PPP2R1BP30154 601 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 EMC2Q15006 297 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 Q6ZRG5 221 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 WDR49Q8IV35 697 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 HSCBQ8IWL3 235 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 Q8N7P7 452 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 TRPV3Q8NET8 790 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 OR7G3Q8NG95 312 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 FLVCR1-AS1Q8TAF5 88 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 PRCCQ92733 491 aaPredicted RBP3.02□□□□□ -1.93
PMS1-203ENST00000409593 GGHQ92820 318 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 TEKT1Q969V4 418 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 WWP1Q9H0M0 922 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 TMEM206Q9H813 350 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 TAS2R16Q9NYV7 291 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 PSORS1C1Q9UIG5 152 aa3.02□□□□□ -1.93
PMS1-203ENST00000409593 PSMA7O14818 248 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 TTI1O43156 1089 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 CCR4P51679 360 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 IGLV3-21P80748 117 aaPredicted RBP3.01□□□□□ -1.93
PMS1-203ENST00000409593 C17orf58Q2M2W7 97 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ANKRD20A4Q4UJ75 823 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 C14orf28Q4W4Y0 310 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ODF2Q5BJF6 829 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ANKRD20A8PQ5CZ79 823 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ANKRD20A2Q5SQ80 823 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 UTF1Q5T230 341 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ANKRD20A1Q5TYW2 823 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ANKRD20A3Q5VUR7 823 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ZNF600Q6ZNG1 722 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 OTOAQ7RTW8 1153 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 CCDC83Q8IWF9 413 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 OR8H3Q8N146 312 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms