RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 FIS1Q9Y3D6 152 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 WASHC1A8K0Z3 465 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 TMEM114B3SHH9 223 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 TMEM233B4DJY2 109 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 SLC28A1O00337 649 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 DPM1O60762 260 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 GPR75O95800 540 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 WDR4P57081 412 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 RAE1P78406 368 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 BTKQ06187 659 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 OR52E8Q6IFG1 317 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 IGFL2Q6UWQ7 119 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 PTRH1Q86Y79 214 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 SIRT6Q8N6T7 355 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 B3GNT7Q8NFL0 401 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 ELP5Q8TE02 316 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 TM4SF18Q96CE8 201 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 METTL2AQ96IZ6 378 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 ATP6V1G3Q96LB4 118 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 SH3GL2Q99962 352 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 PTGFRNQ9P2B2 879 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 CLCA3PQ9Y6N3 262 aa18.55■□□□□ 0.56
PDLIM2-207ENST00000409417 MYOCOSA0A1B0GUC4 107 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 GNG14A0A1W2PPG7 69 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 NPIPB8E9PQR5 432 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 PGRMC2O15173 223 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 PCDH7O60245 1069 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 SNUPNO95149 360 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 TIA1P31483 386 aaKnown RBP eCLIP18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 KLRB1Q12918 225 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 MFAP5Q13361 173 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 H3F3CQ6NXT2 135 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 TMEM132CQ8N3T6 1108 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 TEX19Q8NA77 164 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 FAM76AQ8TAV0 307 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 DNAJB14Q8TBM8 379 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 AGR3Q8TD06 166 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 PTPMT1Q8WUK0 201 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 DAZLQ92904 295 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 RBM18Q96H35 190 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 FAIM2Q9BWQ8 316 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 TUBB1Q9H4B7 451 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 KCNK13Q9HB14 408 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 ZBTB20Q9HC78 741 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 TEKT2Q9UIF3 430 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 ZDHHC2Q9UIJ5 367 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 PCDHA9Q9Y5H5 950 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 PTGDR2Q9Y5Y4 395 aa18.54■□□□□ 0.56
PDLIM2-207ENST00000409417 C1orf226A1L170 272 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 A8MUI8 341 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 B8ZZF3 427 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 RGS14O43566 566 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 ITM2AO43736 263 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 HSPA4LO95757 839 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 LINC00032P0C843 101 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 NEFHP12036 1026 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 BGNP21810 368 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 PRPH2P23942 346 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 STT3AP46977 705 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 ABCE1P61221 599 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 PLIN5Q00G26 463 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 C19orf57Q0VDD7 668 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 Q6ZSR9 355 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 ZADH2Q8N4Q0 377 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 GOLGA6L1Q8N7Z2 621 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 APCDD1LQ8NCL9 501 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 OR14A16Q8NHC5 309 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 TWIST2Q8WVJ9 160 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 UCN3Q969E3 161 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 EPS8L2Q9H6S3 715 aa18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 TNRC6AQ8NDV7 1962 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-207ENST00000409417 LYPLA1O75608 230 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 UQCRHP07919 91 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 ANXA4P09525 319 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 COX7A2P14406 83 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 ALOX15P16050 662 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 TNNI3P19429 210 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 GSTM5P46439 218 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 GPR143P51810 404 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 TAS2R50P59544 299 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 B3GNTL1Q67FW5 361 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 SLC48A1Q6P1K1 146 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 LINC00696Q6ZRV3 163 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 DDIASQ8IXT1 998 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 ST13P4Q8IZP2 240 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 SLC5A8Q8N695 610 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 RBMXL3Q8N7X1 1067 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 MORN4Q8NDC4 146 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 MGARPQ8TDB4 240 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 DGAT2Q96PD7 388 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 CCT7Q99832 543 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 PELOQ9BRX2 385 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 C1orf109Q9NX04 203 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 ANAPC2Q9UJX6 822 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 CES1P1Q9UKY3 287 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 DLGAP4Q9Y2H0 992 aa18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 PRRC2CQ9Y520 2896 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-207ENST00000409417 C17orf105B2RV13 164 aa18.52■□□□□ 0.55
PDLIM2-207ENST00000409417 SEC22BO75396 215 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms