RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 CPSF6Q16630 551 aaKnown RBP eCLIP20.85■□□□□ 0.93
KDELR3-202ENST00000409006 RELL1Q8IUW5 271 aa20.85■□□□□ 0.93
KDELR3-202ENST00000409006 UCN3Q969E3 161 aa20.85■□□□□ 0.93
KDELR3-202ENST00000409006 SCYL1Q96KG9 808 aa20.85■□□□□ 0.93
KDELR3-202ENST00000409006 DMRTA2Q96SC8 542 aa20.85■□□□□ 0.93
KDELR3-202ENST00000409006 RPF2Q9H7B2 306 aaKnown RBP20.85■□□□□ 0.93
KDELR3-202ENST00000409006 IPPKQ9H8X2 491 aa20.85■□□□□ 0.93
KDELR3-202ENST00000409006 PCDHGA11Q9Y5H2 935 aa20.85■□□□□ 0.93
KDELR3-202ENST00000409006 NINQ8N4C6 2090 aa20.85■□□□□ 0.93
KDELR3-202ENST00000409006 PHF3Q92576 2039 aaKnown RBP20.85■□□□□ 0.93
KDELR3-202ENST00000409006 MYO9AB2RTY4 2548 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 CCDC189A1A4V9 331 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 H0YIV9 168 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 EEDO75530 441 aaKnown RBP20.84■□□□□ 0.93
KDELR3-202ENST00000409006 ACSL3O95573 720 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 ECHS1P30084 290 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 BSGP35613 385 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 MAGEA12P43365 314 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 STT3AP46977 705 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 SMSP52788 366 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 TNFRSF17Q02223 184 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 FOLH1Q04609 750 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 WHAMMP3Q1A5X7 153 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 GPR180Q86V85 440 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 GPALPP1Q8IXQ4 340 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 ZCCHC7Q8N3Z6 543 aaKnown RBP20.84■□□□□ 0.93
KDELR3-202ENST00000409006 MMGT1Q8N4V1 131 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 OR2M7Q8NG81 312 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 OR8K3Q8NH51 312 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 WDR20Q8TBZ3 569 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 SLC44A1Q8WWI5 657 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 CDK15Q96Q40 435 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 DEFB127Q9H1M4 99 aa20.84■□□□□ 0.93
KDELR3-202ENST00000409006 FREM3P0C091 2139 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 ABCA12Q86UK0 2595 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 OR7A17O14581 309 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 PRRG2O14669 202 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 PROM1O43490 865 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 TMPRSS11DO60235 418 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 IGKV3-11P04433 115 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 AGAP20933 346 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 PTGS2P35354 604 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 MRM1Q6IN84 353 aaKnown RBP20.83■□□□□ 0.93
KDELR3-202ENST00000409006 KLC3Q6P597 504 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 CD163Q86VB7 1156 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 PTGR2Q8N8N7 351 aaPredicted RBP20.83■□□□□ 0.93
KDELR3-202ENST00000409006 L3MBTL4Q8NA19 623 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 OR52B6Q8NGF0 335 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 FAM57AQ8TBR7 257 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 SENP5Q96HI0 755 aaPredicted RBP20.83■□□□□ 0.93
KDELR3-202ENST00000409006 DGAT2Q96PD7 388 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 NOL11Q9H8H0 719 aaKnown RBP20.83■□□□□ 0.93
KDELR3-202ENST00000409006 PLSCR2Q9NRY7 297 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 MTRF1LQ9UGC7 380 aaKnown RBP20.83■□□□□ 0.93
KDELR3-202ENST00000409006 ASB4Q9Y574 426 aa20.83■□□□□ 0.93
KDELR3-202ENST00000409006 APCP25054 2843 aa20.83■□□□□ 0.92
KDELR3-202ENST00000409006 HCFC1P51610 2035 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 A0A0A6YYD5 115 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 A0A1W2PR48 441 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 GLOD5A6NK44 160 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 FAM166BA8MTA8 275 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 E9PLN8 166 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 UGDHO60701 494 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 CLDN14O95500 239 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 TPOP07202 933 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 PTX3P26022 381 aaPredicted RBP20.82■□□□□ 0.92
KDELR3-202ENST00000409006 TNFRSF8P28908 595 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 ASPHQ12797 758 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 C9orf40Q8IXQ3 194 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 MARVELD2Q8N4S9 558 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 PHF10Q8WUB8 498 aaKnown RBP20.82■□□□□ 0.92
KDELR3-202ENST00000409006 IFT81Q8WYA0 676 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 ZNF592Q92610 1267 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 ISL2Q96A47 359 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 MTFMTQ96DP5 389 aaKnown RBP20.82■□□□□ 0.92
KDELR3-202ENST00000409006 PHF21BQ96EK2 531 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 VKORC1Q9BQB6 163 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 CHST11Q9NPF2 352 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 MS4A12Q9NXJ0 267 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 PHF11Q9UIL8 331 aa20.82■□□□□ 0.92
KDELR3-202ENST00000409006 FBN2P35556 2912 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 PPIAP62937 165 aaKnown RBP20.81■□□□□ 0.92
KDELR3-202ENST00000409006 FAM219BQ5XKK7 198 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 RTL4Q6ZR62 310 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 OR5L2Q8NGL0 311 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 UHMK1Q8TAS1 419 aaKnown RBP20.81■□□□□ 0.92
KDELR3-202ENST00000409006 TANKQ92844 425 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 RBM18Q96H35 190 aaKnown RBP20.81■□□□□ 0.92
KDELR3-202ENST00000409006 NSUN5Q96P11 429 aaKnown RBP20.81■□□□□ 0.92
KDELR3-202ENST00000409006 PAFAH2Q99487 392 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 CENPKQ9BS16 269 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 TTTY12Q9BZ98 90 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 DDX31Q9H8H2 851 aaKnown RBP20.81■□□□□ 0.92
KDELR3-202ENST00000409006 ZBTB26Q9HCK0 441 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 COPS7AQ9UBW8 275 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 PPT2Q9UMR5 302 aa20.81■□□□□ 0.92
KDELR3-202ENST00000409006 TNPO3Q9Y5L0 923 aaKnown RBP20.81■□□□□ 0.92
KDELR3-202ENST00000409006 A0A1W2PS29 197 aa20.8■□□□□ 0.92
KDELR3-202ENST00000409006 GLSO94925 669 aaPredicted RBP20.8■□□□□ 0.92
KDELR3-202ENST00000409006 CLDN9O95484 217 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms