RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 RPS13P62277 151 aaKnown RBP12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 CSNK2BP67870 215 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 PPP2R2BQ00005 443 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 E2F1Q01094 437 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 FZD2Q14332 565 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 SLBPQ14493 270 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 GTDC1Q4AE62 458 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 COLEC12Q5KU26 742 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 PRAMEF13Q5VWM6 474 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 TRIM40Q6P9F5 258 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 SPESP1Q6UW49 350 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 TRIM74Q86UV6 250 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 ANKRD46Q86W74 232 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 ZC3H7AQ8IWR0 971 aaKnown RBP12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 ZZZ3Q8IYH5 903 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 METTL4Q8N3J2 472 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 C11orf65Q8NCR3 313 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 OR4A15Q8NGL6 344 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 CDC26Q8NHZ8 85 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 NEIL2Q969S2 332 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 PPCDCQ96CD2 204 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 COX14Q96I36 57 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 EGLN2Q96KS0 407 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 WDR92Q96MX6 357 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 OR4K3Q96R72 315 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 ZNF347Q96SE7 839 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 AIF1LQ9BQI0 150 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 RAB11FIP5Q9BXF6 653 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 TOR3AQ9H497 397 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 IKZF5Q9H5V7 419 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 RMI1Q9H9A7 625 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 DMRT3Q9NQL9 472 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 SH3BP4Q9P0V3 963 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 TMEM98Q9Y2Y6 226 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 SNX5Q9Y5X3 404 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 PIPSLA2A3N6 862 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 ANKDD1BA6NHY2 528 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 H3BSA7 217 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 SUV39H1O43463 412 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 HS6ST1O60243 411 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 NOBOXO60393 691 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 ABCB7O75027 752 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 MT-ND1P03886 318 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 ZNF8P17098 575 aaPredicted RBP12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 CDKN2CP42773 168 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 SRP54P61011 504 aaKnown RBP12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 TAP2Q03519 686 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 TSTA3Q13630 321 aaPredicted RBP12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 LRRC23Q53EV4 343 aaPredicted RBP12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 ZNF542PQ5EBM4 170 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 TBPL2Q6SJ96 375 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 RD3Q7Z3Z2 195 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 PARGQ86W56 976 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 C17orf64Q86WR6 236 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 OXR1Q8N573 874 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 TBC1D19Q8N5T2 526 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 ZFP90Q8TF47 636 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 TSACCQ96A04 125 aaPredicted RBP12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 FBXL20Q96IG2 436 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 MUS81Q96NY9 551 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 APOL4Q9BPW4 351 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 NPLQ9BXD5 320 aaPredicted RBP12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 TRIT1Q9H3H1 467 aaKnown RBP12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 REEP1Q9H902 201 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 ERVMER34-1Q9H9K5 563 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 ENOPH1Q9UHY7 261 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 MOSPD1Q9UJG1 213 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 FAF1Q9UNN5 650 aaPredicted RBP12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 ASF1AQ9Y294 204 aa12.27□□□□□ -0.45
SMARCB1-203ENST00000407082 LOC100130705A0A1B0GUX0 176 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 TNFRSF10CO14798 259 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 SIGLEC6O43699 453 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 TBX19O60806 448 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 CEACAM5P06731 702 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 GNAO1P09471 354 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 CCDC159P0C7I6 412 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 LAMP1P11279 417 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 RAE1P78406 368 aaKnown RBP12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 C2orf80Q0P641 193 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 EIF2B5Q13144 721 aaKnown RBP12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 KEAP1Q14145 624 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 SPIDRQ14159 915 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 RGNQ15493 299 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 HKDC1Q2TB90 917 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 ZIK1Q3SY52 487 aaPredicted RBP12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 TMIGD1Q6UXZ0 262 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 CLVS1Q8IUQ0 354 aaPredicted RBP12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 CACTIN-AS1Q8N1I8 211 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 TTLQ8NG68 377 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 OR52N2Q8NGI0 321 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 C16orf78Q8WTQ4 265 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 SMPDL3AQ92484 453 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 TFGQ92734 400 aaPredicted RBP12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 SH3KBP1Q96B97 665 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 EPYCQ99645 322 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 DPH1Q9BZG8 443 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 ABCG4Q9H172 646 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 OR52A5Q9H2C5 316 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 RHBGQ9H310 441 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms