RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 KCNC1P48547 511 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 TGM3Q08188 693 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 ACSF3Q4G176 576 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-203ENST00000400911 PRAMEF9Q5VWM5 478 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 LYPD8Q6UX82 237 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 ZNF793Q6ZN11 406 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 CHSY3Q70JA7 882 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 UBE3DQ7Z6J8 389 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 C9orf40Q8IXQ3 194 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 LIX1Q8N485 282 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 FAM13CQ8NE31 585 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 OR10G3Q8NGC4 313 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 LINC01560Q8TB33 94 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 NUBPLQ8TB37 319 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 SLC22A8Q8TCC7 542 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 ANKRD49Q8WVL7 239 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 PPWD1Q96BP3 646 aaKnown RBP13.39□□□□□ -0.27
VAMP1-203ENST00000400911 SPACA9Q96E40 222 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-203ENST00000400911 C18orf12Q96KH6 178 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 KCNC2Q96PR1 638 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 CAPS2Q9BXY5 557 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 EPB41L4BQ9H329 900 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 PLEKHF2Q9H8W4 249 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 CTNNAL1Q9UBT7 734 aa13.39□□□□□ -0.27
VAMP1-203ENST00000400911 ZNF629Q9UEG4 869 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-203ENST00000400911 MTRF1LQ9UGC7 380 aaKnown RBP13.39□□□□□ -0.27
VAMP1-203ENST00000400911 AKAP6Q13023 2319 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 C15orf38-AP3S2A0A0A6YYH1 394 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 AHRRA9YTQ3 701 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 RTCAO00442 366 aaKnown RBP13.38□□□□□ -0.27
VAMP1-203ENST00000400911 TAPBPO15533 448 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 FGF17O60258 216 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 LRATO95237 230 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 IGKV3-11P04433 115 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 INHBBP09529 407 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 ATP5A1P25705 553 aaKnown RBP13.38□□□□□ -0.27
VAMP1-203ENST00000400911 ELK3P41970 407 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 DUSP8Q13202 625 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 PPP1R7Q15435 360 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 FBXO48Q5FWF7 155 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 TMEM198Q66K66 360 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 CLEC9AQ6UXN8 241 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 DGAT2L6Q6ZPD8 337 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 MAATS1Q7Z4T9 603 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 GAS2L3Q86XJ1 694 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 ACOT4Q8N9L9 421 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 DOK4Q8TEW6 326 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 GRK7Q8WTQ7 553 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 ESAMQ96AP7 390 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 TIMP4Q99727 224 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 EHD1Q9H4M9 534 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 NEUROD4Q9HD90 331 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 GPRC5BQ9NZH0 403 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 CNIH4Q9P003 139 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 FOXD3Q9UJU5 478 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-203ENST00000400911 PSAT1Q9Y617 370 aa13.38□□□□□ -0.27
VAMP1-203ENST00000400911 CHCHD2Q9Y6H1 151 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-203ENST00000400911 ZNF407Q9C0G0 2248 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 FBN3Q75N90 2809 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 DNALI1O14645 258 aaPredicted RBP13.37□□□□□ -0.27
VAMP1-203ENST00000400911 CLGNO14967 610 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 SH3BGRLO75368 114 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 IL2RAP01589 272 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 COX7A2P14406 83 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 CD22P20273 847 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 TIMP3P35625 211 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 MSH2P43246 934 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 STT3AP46977 705 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 AGFG1P52594 562 aaKnown RBP13.37□□□□□ -0.27
VAMP1-203ENST00000400911 ZNF136P52737 540 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 TAS2R39P59534 338 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 TBL3Q12788 808 aaKnown RBP13.37□□□□□ -0.27
VAMP1-203ENST00000400911 DOC2AQ14183 400 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 TGFBIQ15582 683 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 ADAMTSL2Q86TH1 951 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 LACC1Q8IV20 430 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 SPATA6LQ8N4H0 392 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 SLC15A4Q8N697 577 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 RBM18Q96H35 190 aaKnown RBP13.37□□□□□ -0.27
VAMP1-203ENST00000400911 PBKQ96KB5 322 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 DGAT2Q96PD7 388 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 TMEM79Q9BSE2 394 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 TBCDQ9BTW9 1192 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 DOHHQ9BU89 302 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 ROGDIQ9GZN7 287 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 PRM3Q9NNZ6 103 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 DNAJC11Q9NVH1 559 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 QPCTLQ9NXS2 382 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 ASIC3Q9UHC3 531 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 CNOT11Q9UKZ1 510 aaKnown RBP13.37□□□□□ -0.27
VAMP1-203ENST00000400911 CHMP2BQ9UQN3 213 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 SPACA6W5XKT8 324 aa13.37□□□□□ -0.27
VAMP1-203ENST00000400911 FLNAP21333 2647 aaKnown RBP13.37□□□□□ -0.27
VAMP1-203ENST00000400911 PHF3Q92576 2039 aaKnown RBP13.36□□□□□ -0.27
VAMP1-203ENST00000400911 FAM95CA0A1B0GW59 222 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 GOLGA6L6A8MZA4 724 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 SAP18O00422 153 aaKnown RBP13.36□□□□□ -0.27
VAMP1-203ENST00000400911 DYRK3O43781 588 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 TRAPPC6AO75865 159 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 C1QAP02745 245 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms