RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 RWDD3Q9Y3V2 267 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 SPINT1O43278 529 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 SEMA7AO75326 666 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 SEC23BQ15437 767 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 IL17FQ96PD4 163 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 TMCC3Q9ULS5 477 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 LSM2Q9Y333 95 aaKnown RBP24.32■■□□□ 1.48
COL13A1-203ENST00000398969 CHD7Q9P2D1 2997 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 A0A075B6Q4 140 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 KPNA3O00505 521 aaPredicted RBP24.31■■□□□ 1.48
COL13A1-203ENST00000398969 SCG5P05408 212 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 EPCAMP16422 314 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 FEN1P39748 380 aaKnown RBP24.31■■□□□ 1.48
COL13A1-203ENST00000398969 CASP3P42574 277 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 METAP1P53582 386 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 RHAGQ02094 409 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 KHDRBS1Q07666 443 aaKnown RBP eCLIP24.31■■□□□ 1.48
COL13A1-203ENST00000398969 PRAMEF14Q5SWL7 426 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 PRAMEF13Q5VWM6 474 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 TMEM19Q96HH6 336 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 PRRC2BQ5JSZ5 2229 aaKnown RBP24.31■■□□□ 1.48
COL13A1-203ENST00000398969 KIAA1549LQ6ZVL6 1849 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 KIF26AQ9ULI4 1882 aaPredicted RBP24.31■■□□□ 1.48
COL13A1-203ENST00000398969 A8MU76 341 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 MFN2O95140 757 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 IGFBP1P08833 259 aaPredicted RBP24.31■■□□□ 1.48
COL13A1-203ENST00000398969 DDCP20711 480 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 ILKQ13418 452 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 ZNF77Q15935 545 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 ZNF547Q8IVP9 402 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 ADGRF3Q8IZF5 1079 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 SETD7Q8WTS6 366 aaKnown RBP24.31■■□□□ 1.48
COL13A1-203ENST00000398969 CHAC2Q8WUX2 184 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 CTRCQ99895 268 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 SLC30A2Q9BRI3 323 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 TBC1D14Q9P2M4 693 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 NDOR1Q9UHB4 597 aa24.31■■□□□ 1.48
COL13A1-203ENST00000398969 PI15O43692 258 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 DYRK3O43781 588 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 SOX14O95416 240 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 ELAVL4P26378 380 aaKnown RBP24.3■■□□□ 1.48
COL13A1-203ENST00000398969 ACADLP28330 430 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 CSTF2P33240 577 aaKnown RBP eCLIP24.3■■□□□ 1.48
COL13A1-203ENST00000398969 DGKGP49619 791 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 ARHGAP15Q53QZ3 475 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 SLX4IPQ5VYV7 408 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 TCTN3Q6NUS6 607 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 FAM129CQ86XR2 697 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 CEP19Q96LK0 163 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 FBXL12Q9NXK8 326 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 DNAJC27Q9NZQ0 273 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 CRNNQ9UBG3 495 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-203ENST00000398969 RBMX2Q9Y388 322 aaKnown RBP24.3■■□□□ 1.48
COL13A1-203ENST00000398969 C5orf67F2Z3F1 127 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 PLPP1O14494 284 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 EIF2S1P05198 315 aaKnown RBP24.3■■□□□ 1.48
COL13A1-203ENST00000398969 NFE2L1Q14494 772 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 TMEM201Q5SNT2 666 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 FAM92BQ6ZTR7 304 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 C2orf73Q8N5S3 287 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-203ENST00000398969 OR5P2Q8WZ92 322 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 CCDC32Q9BV29 185 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 CNPPD1Q9BV87 410 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 ZNF717Q9BY31 904 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-203ENST00000398969 ZDHHC5Q9C0B5 715 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 HOXD1Q9GZZ0 328 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 ABCG4Q9H172 646 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 CLEC2DQ9UHP7 191 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 MGAT4BQ9UQ53 548 aa24.3■■□□□ 1.48
COL13A1-203ENST00000398969 ANKDD1BA6NHY2 528 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 PDZK1P1A8MUH7 402 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 OXSR1O95747 527 aaPredicted RBP24.29■■□□□ 1.48
COL13A1-203ENST00000398969 TBX6O95947 436 aaPredicted RBP24.29■■□□□ 1.48
COL13A1-203ENST00000398969 CKMT1AP12532 417 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 MYOGP15173 224 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 OPRD1P41143 372 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 SOX3P41225 446 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 PCYT1AP49585 367 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 RAET1GQ6H3X3 334 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 KRT78Q8N1N4 520 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 CELF2-AS1Q8N7Q2 184 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 ASPNQ9BXN1 380 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 SMURF1Q9HCE7 757 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 C14orf119Q9NWQ9 140 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 MARK1Q9P0L2 795 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 PLAGL1Q9UM63 463 aa24.29■■□□□ 1.48
COL13A1-203ENST00000398969 NOTCH4Q99466 2003 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 SSX4O60224 188 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 CSO75390 466 aaKnown RBP24.28■■□□□ 1.48
COL13A1-203ENST00000398969 POP7O75817 140 aaKnown RBP24.28■■□□□ 1.48
COL13A1-203ENST00000398969 CD72P21854 359 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 DCST1Q5T197 706 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 MEDAGQ5VYS4 303 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 C12orf73Q69YU5 71 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 LCTLQ6UWM7 567 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 SPATC1Q76KD6 591 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 WDR53Q7Z5U6 358 aaPredicted RBP24.28■■□□□ 1.48
COL13A1-203ENST00000398969 IL17RDQ8NFM7 739 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 KLHL6Q8WZ60 621 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 RAB8BQ92930 207 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms