RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 P4HA3Q7Z4N8 544 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 KCNMB4Q86W47 210 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 DENND1CQ8IV53 801 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 OR52N2Q8NGI0 321 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ARNTL2Q8WYA1 636 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 CORO2AQ92828 525 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ISL2Q96A47 359 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 MRGPRFQ96AM1 343 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 RCN3Q96D15 328 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 CPB2Q96IY4 423 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ELF4Q99607 663 aaPredicted RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 PTDSS2Q9BVG9 487 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 UPF3AQ9H1J1 476 aaKnown RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 IL1RAPQ9NPH3 570 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 NIT2Q9NQR4 276 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 OXSMQ9NWU1 459 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 CCDC59Q9P031 241 aaKnown RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 PEF1Q9UBV8 284 aaKnown RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 COL4A4P53420 1690 aaPredicted RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 METTL21EPA6NDL7 271 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 SOWAHBA6NEL2 793 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 A8MUA0 341 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 AP2A1O95782 977 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC25A27O95847 323 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 F11P03951 625 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 GLDCP23378 1020 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 AHRP35869 848 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 MAP3K8P41279 467 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 MYBPC1Q00872 1141 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 GRIK2Q13002 908 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC12A1Q13621 1099 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC25A52Q3SY17 297 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 MRNIPQ6NTE8 343 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ZBTB49Q6ZSB9 765 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 RAB44Q7Z6P3 723 aaPredicted RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 VTCN1Q7Z7D3 282 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 GPR180Q86V85 440 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 GCNT2Q8N0V5 402 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 SPAG16Q8N0X2 631 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 GHDCQ8N2G8 530 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 COMMD1Q8N668 190 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 CCDC185Q8N715 623 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 LRRC52Q8N7C0 313 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 NETO2Q8NC67 525 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 OR9A2Q8NGT5 310 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 C9orf43Q8TAL5 461 aaPredicted RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 OR52B2Q96RD2 323 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 CPPED1Q9BRF8 314 aaPredicted RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 MRPL45Q9BRJ2 306 aaKnown RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 IFT27Q9BW83 186 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 IL22Q9GZX6 179 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF358Q9NW07 568 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 C14orf119Q9NWQ9 140 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 MMACHCQ9Y4U1 282 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 TRBC2A0A5B9 178 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 K7ESF4 209 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 PRAMEF2O60811 474 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 FGBP02675 491 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 HMBSP08397 361 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 MBL2P11226 248 aaPredicted RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 UGT1A6P19224 532 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 TEAD1P28347 426 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 EPHA3P29320 983 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 CCR7P32248 378 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 VEGFCP49767 419 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 RIPPLY1Q0D2K3 151 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 SNTB2Q13425 540 aaKnown RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ASAH1Q13510 395 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 PAN2Q504Q3 1202 aaKnown RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 RAP1GAP2Q684P5 730 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ANKRD26P1Q6NSI1 321 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 BRAT1Q6PJG6 821 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC39A5Q6ZMH5 540 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 RNF111Q6ZNA4 994 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF567Q8N184 647 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 TRUB1Q8WWH5 349 aaKnown RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 NR4A3Q92570 626 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 NKD1Q969G9 470 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ZSWIM3Q96MP5 696 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 VAT1Q99536 393 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 CDCA3Q99618 268 aaPredicted RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF559Q9BR84 538 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 POT1Q9NUX5 634 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 UTS2RQ9UKP6 389 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 NDRG2Q9UN36 371 aaKnown RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 MGAT4BQ9UQ53 548 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF281Q9Y2X9 895 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 GRIP1Q9Y3R0 1128 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ZBTB42B2RXF5 422 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 QSOX1O00391 747 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ABCD4O14678 606 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 KHNYNO15037 678 aaKnown RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 GALR2O43603 387 aaPredicted RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 CHP2O43745 196 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 IQCF3P0C7M6 154 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 INSRRP14616 1297 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 GRM5P41594 1212 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 MAGEA12P43365 314 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 NPY4RP50391 375 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 MLLT10P55197 1068 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms