RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 COQ8BQ96D53 544 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 PYURFQ96I23 114 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ZSWIM3Q96MP5 696 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 GPR137Q96N19 417 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SAMD11Q96NU1 681 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 KCNC2Q96PR1 638 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 NELL2Q99435 816 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 HTATIP2Q9BUP3 242 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 WRAP53Q9BUR4 548 aaKnown RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 LINC00597Q9H2U6 94 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TMEM245Q9H330 911 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SAV1Q9H4B6 383 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 BRD9Q9H8M2 597 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 GORASP2Q9H8Y8 452 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 MRPL17Q9NRX2 175 aaKnown RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 RHCGQ9UBD6 479 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 MUTYHQ9UIF7 546 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TMEFF2Q9UIK5 374 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 ACSL6Q9UKU0 697 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ACSL5Q9ULC5 683 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 RIMKLBQ9ULI2 386 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 INSL5Q9Y5Q6 135 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 HCFC2Q9Y5Z7 792 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SESN1Q9Y6P5 492 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 STON1Q9Y6Q2 735 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 WDR87Q6ZQQ6 2873 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 FRMPD3Q5JV73 1810 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 MAGEB17A8MXT2 336 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 M0R082 166 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 MYL12BO14950 172 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 GMDSO60547 372 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 FGF18O76093 207 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 NPPAP01160 153 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 CSF2P04141 144 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 URODP06132 367 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 OR56A5P0C7T3 313 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ACRP10323 421 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 MYL12AP19105 171 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ALAS2P22557 587 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 MAOBP27338 520 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 AOAHP28039 575 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 CRATP43155 626 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 AP1S2P56377 157 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 MC1RQ01726 317 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 MADCAM1Q13477 382 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TP53BP2Q13625 1128 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ELOAQ14241 798 aaKnown RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 GANABQ14697 944 aaKnown RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 MAD2L1BPQ15013 274 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 TBCEQ15813 527 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 CLLU1Q5K131 121 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SLC35F1Q5T1Q4 408 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 PDZK1Q5T2W1 519 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 CPZQ66K79 652 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ASTLQ6HA08 431 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 CORO6Q6QEF8 472 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 HMGN2P46Q86SG4 172 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 DCAF4L2Q8NA75 395 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 KCT2Q8NC54 265 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 MYDGFQ969H8 173 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SIPA1Q96FS4 1042 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 HSH2DQ96JZ2 352 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 COPS4Q9BT78 406 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TGIF2Q9GZN2 237 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 RACGAP1Q9H0H5 632 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 C11orf54Q9H0W9 315 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 OR51E2Q9H255 320 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 CLEC4MQ9H2X3 399 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 SUV39H2Q9H5I1 410 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 RERGLQ9H628 205 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 RNF167Q9H6Y7 350 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 CWH43Q9H720 699 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SIRT5Q9NXA8 310 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ENOPH1Q9UHY7 261 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 LSM7Q9UK45 103 aaKnown RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 ING4Q9UNL4 249 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 KLF2Q9Y5W3 355 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 ALG5Q9Y673 324 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 GON4LQ3T8J9 2241 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 A0A0B4J293 547 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ANTXRLA6NF34 631 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SMLR1H3BR10 107 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 J3KTA2 159 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 KIAA0513O60268 411 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ABLIM3O94929 683 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SLC16A8O95907 504 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TGFB1P01137 390 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 RRASP10301 218 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ZP3P21754 424 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 CD9P21926 228 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 PTGER1P34995 402 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TM4SF4P48230 202 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 METAP1P53582 386 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 CTSCP53634 463 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 AP1S1P61966 158 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 FLI1Q01543 452 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.8□□□□□ -1.64
SSR1-202ENST00000397511 MAD2L1Q13257 205 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 CDKN3Q16667 212 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 UGT8Q16880 541 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms