RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MLC1Q15049 377 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 AGBL5Q8NDL9 886 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 SUN3Q8TAQ9 357 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 OR5P2Q8WZ92 322 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 ZBED6CLQ96FA7 236 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-203ENST00000397442 AMDHD1Q96NU7 426 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 GLIPR2Q9H4G4 154 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 RARRES3Q9UL19 164 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 FER1L5A0AVI2 2057 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 PCNX2A6NKB5 2137 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 A8MUI8 341 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 DSCR3O14972 297 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 C8orf89P0DMQ9 161 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 RNH1P13489 461 aaKnown RBP25.9■■□□□ 1.74
CPNE1-203ENST00000397442 ALAS2P22557 587 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 MANFP55145 182 aaKnown RBP25.9■■□□□ 1.74
CPNE1-203ENST00000397442 E2F1Q01094 437 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 INSM1Q01101 510 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-203ENST00000397442 CCDC157Q569K6 752 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 FAM156AQ8NDB6 213 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 CCDC124Q96CT7 223 aaKnown RBP25.9■■□□□ 1.74
CPNE1-203ENST00000397442 PSME2Q9UL46 239 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 VPS4AQ9UN37 437 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 PCDHGB4Q9UN71 923 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 CLCA2Q9UQC9 943 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 L3MBTL1Q9Y468 752 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 MAU2Q9Y6X3 613 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 EFCAB7A8K855 629 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 ME2P23368 584 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 MSX2P35548 267 aaPredicted RBP25.89■■□□□ 1.73
CPNE1-203ENST00000397442 ELF3P78545 371 aaPredicted RBP25.89■■□□□ 1.73
CPNE1-203ENST00000397442 GPR155Q7Z3F1 870 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 CLEC4FQ8N1N0 589 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 PSMA8Q8TAA3 256 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 WDR60Q8WVS4 1066 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 ZDHHC19Q8WVZ1 309 aaPredicted RBP25.89■■□□□ 1.73
CPNE1-203ENST00000397442 PEX11GQ96HA9 241 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 CXorf36Q9H7Y0 433 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 APMAPQ9HDC9 416 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 SIRT3Q9NTG7 399 aaPredicted RBP25.89■■□□□ 1.73
CPNE1-203ENST00000397442 NDOR1Q9UHB4 597 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 GMEB1Q9Y692 573 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 SEC16AO15027 2179 aa25.89■■□□□ 1.73
CPNE1-203ENST00000397442 FEN1P39748 380 aaKnown RBP25.88■■□□□ 1.73
CPNE1-203ENST00000397442 OR1D4P47884 311 aa25.88■■□□□ 1.73
CPNE1-203ENST00000397442 EEFSECP57772 596 aaKnown RBP25.88■■□□□ 1.73
CPNE1-203ENST00000397442 RHBDD2Q6NTF9 364 aa25.88■■□□□ 1.73
CPNE1-203ENST00000397442 PWWP2BQ6NUJ5 590 aa25.88■■□□□ 1.73
CPNE1-203ENST00000397442 C10orf111Q8N326 155 aa25.88■■□□□ 1.73
CPNE1-203ENST00000397442 ZFP90Q8TF47 636 aa25.88■■□□□ 1.73
CPNE1-203ENST00000397442 BBS4Q96RK4 519 aa25.88■■□□□ 1.73
CPNE1-203ENST00000397442 PHOX2BQ99453 314 aa25.88■■□□□ 1.73
CPNE1-203ENST00000397442 DENND2DQ9H6A0 471 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-203ENST00000397442 ZNF282Q9UDV7 671 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-203ENST00000397442 POMPQ9Y244 141 aa25.88■■□□□ 1.73
CPNE1-203ENST00000397442 ZNF292O60281 2723 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 A0A1B0GX78 115 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 NVLO15381 856 aaKnown RBP25.87■■□□□ 1.73
CPNE1-203ENST00000397442 FGF17O60258 216 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 HSD17B1P14061 328 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 TCN1P20061 433 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-203ENST00000397442 NTSP30990 170 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 LIPEQ05469 1076 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 HSPB3Q12988 150 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 CDCP2Q5VXM1 449 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 GLRX5Q86SX6 157 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 OR4N5Q8IXE1 308 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 OR4K14Q8NGD5 310 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 OR51Q1Q8NH59 317 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 TANKQ92844 425 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 THUMPD3Q9BV44 507 aaKnown RBP25.87■■□□□ 1.73
CPNE1-203ENST00000397442 RBCK1Q9BYM8 510 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 TPT1P8Q9HAU6 139 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 SRPK3Q9UPE1 567 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 ENTPD4Q9Y227 616 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 PCDHGA1Q9Y5H4 931 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 ZNF780BQ9Y6R6 833 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 CLIC1O00299 241 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 LDB3O75112 727 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 FGF5P12034 268 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 CSNK2A2P19784 350 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-203ENST00000397442 GSK3BP49841 420 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 CDK9P50750 372 aaKnown RBP25.87■■□□□ 1.73
CPNE1-203ENST00000397442 NCBP2P52298 156 aaKnown RBP eCLIP25.87■■□□□ 1.739e-8■□□□□ 9.8
CPNE1-203ENST00000397442 MS4A2Q01362 244 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 FOLH1Q04609 750 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 TRIP6Q15654 476 aaKnown RBP25.87■■□□□ 1.73
CPNE1-203ENST00000397442 SPATS1Q496A3 300 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 CCDC116Q8IYX3 515 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 SLC38A9Q8NBW4 561 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 ADAMTS18Q8TE60 1221 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 ANKRD9Q96BM1 317 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-203ENST00000397442 SH3GL1Q99961 368 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 ALG2Q9H553 416 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 KAT8Q9H7Z6 458 aaKnown RBP25.87■■□□□ 1.73
CPNE1-203ENST00000397442 NEUROD4Q9HD90 331 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 CDC14AQ9UNH5 594 aa25.87■■□□□ 1.73
CPNE1-203ENST00000397442 KIF26BQ2KJY2 2108 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 H0YHG0 523 aa25.86■■□□□ 1.73
CPNE1-203ENST00000397442 CCL4P13236 92 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms