RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ZNF217O75362 1048 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MT-ND2P03891 347 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 IQCF3P0C7M6 154 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PROZP22891 400 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 RABIFP47224 123 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 NRLP54845 237 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 GRM2Q14416 872 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 NFE2L1Q14494 772 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 VMACQ2NL98 169 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 METTL2BQ6P1Q9 378 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 WDR92Q96MX6 357 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SLC2A13Q96QE2 648 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 LRRN3Q9H3W5 708 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PLAGL1Q9UM63 463 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 GLOD5A6NK44 160 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 RP2O75695 350 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 DIRAS1O95057 198 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 HBQ1P09105 142 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 CFL1P23528 166 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 DEFA5Q01523 94 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 OGDHQ02218 1023 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MADCAM1Q13477 382 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 CCSAPQ6IQ19 270 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SNX29P2Q8IUI4 249 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 HS3ST5Q8IZT8 346 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PHTF2Q8N3S3 785 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SPERTQ8NA61 448 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM41AQ96HV5 264 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MRGPRX2Q96LB1 330 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 HSPA12BQ96MM6 686 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MCHR1Q99705 422 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 BARD1Q99728 777 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 WACQ9BTA9 647 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 POTEKPQ9BYX7 375 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 KLHL21Q9UJP4 597 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ABCG2Q9UNQ0 655 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TSPAN4O14817 238 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RBBP9O75884 186 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 APOL3O95236 402 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 OR1E2P47887 323 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 TBPL1P62380 186 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 LMAN2Q12907 356 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 GNMTQ14749 295 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RHEBQ15382 184 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 UGT3A2Q3SY77 523 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 CATSPEREQ5SY80 951 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 OR4C11Q6IEV9 310 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 SYCE2Q6PIF2 218 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PQLC3Q8N755 202 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 OR4K3Q96R72 315 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 OR10A4Q9H209 315 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PAK1IP1Q9NWT1 392 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 SUSD2Q9UGT4 822 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 BACE2Q9Y5Z0 518 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 DNMT3AQ9Y6K1 912 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PRKYO43930 277 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 CDC40O60508 579 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RFPL1O75677 317 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 JUPP14923 745 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ATF4P18848 351 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ETV3P41162 512 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 MAGEA12P43365 314 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 SPINT3P49223 89 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 AGTR2P50052 363 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 NUDT6P53370 316 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RPS3AP61247 264 aaKnown RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ELOAQ14241 798 aaKnown RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 COQ5Q5HYK3 327 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 HORMAD2Q8N7B1 307 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PROKR1Q8TCW9 393 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PTCHD1Q96NR3 888 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PIP5K1AQ99755 562 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 NANSQ9NR45 359 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 HCN2Q9UL51 889 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 DHDHQ9UQ10 334 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 TEX13DA0A0J9YY54 714 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 H2BFMP0C1H6 154 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RNH1P13489 461 aaKnown RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 CARTPTQ16568 116 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ARHGAP11AQ6P4F7 1023 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 BORAQ6PGQ7 559 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PLD6Q8N2A8 252 aaKnown RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF559Q9BR84 538 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ARHGAP9Q9BRR9 750 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 KIAA1217Q5T5P2 1943 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 C13orf42A0A1B0GVH6 325 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 A0A1W2PPL8 197 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 LSM1O15116 133 aaKnown RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 LDB2O43679 373 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 BCKDHAP12694 445 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 HOXB9P17482 250 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PGCP20142 388 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 FOXK1P85037 733 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 HYAL2Q12891 473 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 MELKQ14680 651 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM69Q5SWH9 247 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RNF111Q6ZNA4 994 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 SEC14L1Q92503 715 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 TCEAL3Q969E4 200 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 URM1Q9BTM9 101 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms