RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MVB12AQ96EY5 273 aa19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 CNRIP1Q96F85 164 aaPredicted RBP19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 ECSITQ9BQ95 431 aa19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 ALG2Q9H553 416 aa19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 IKZF5Q9H5V7 419 aa19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 DENND2DQ9H6A0 471 aaPredicted RBP19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 DHCR7Q9UBM7 475 aaKnown RBP19.25■□□□□ 0.67
VCPKMT-202ENST00000395860 EVPLLA8MZ36 301 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 CLIC1O00299 241 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 FOXD2O60548 495 aaPredicted RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 HSD17B1P14061 328 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 CSNK2A2P19784 350 aaPredicted RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 SOAT1P35610 550 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 GCGRP47871 477 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 NCBP2P52298 156 aaKnown RBP eCLIP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 MAT1AQ00266 395 aaKnown RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 MLC1Q15049 377 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 RBM44Q6ZP01 1051 aaKnown RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 IFNEQ86WN2 208 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 SHISA5Q8N114 240 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 OR4K14Q8NGD5 310 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 ADAMTS18Q8TE60 1221 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 SLC7A5P2Q9GIP4 190 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 GLIPR2Q9H4G4 154 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 NEUROD4Q9HD90 331 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 SIDT1Q9NXL6 827 aaKnown RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 SUCOQ9UBS9 1254 aaKnown RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 CDC14AQ9UNH5 594 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 AP3M1Q9Y2T2 418 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 MYO1GB0I1T2 1018 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 FAM227AF5H4B4 570 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 DSCR3O14972 297 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 RFPL3O75679 317 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 FEN1P39748 380 aaKnown RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 ILKQ13418 452 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 GAB1Q13480 694 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 KPNB1Q14974 876 aaKnown RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 C16orf72Q14CZ0 275 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 SAMD14Q8IZD0 417 aaPredicted RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 AGBL5Q8NDL9 886 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 PEX11GQ96HA9 241 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 AMDHD1Q96NU7 426 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 KCTD14Q9BQ13 255 aaPredicted RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 SLC35A5Q9BS91 424 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 TPT1P8Q9HAU6 139 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 OCIAD1Q9NX40 245 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 GMPR2Q9P2T1 348 aaKnown RBP19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 SRPK3Q9UPE1 567 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 SNX8Q9Y5X2 465 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 MAU2Q9Y6X3 613 aa19.24■□□□□ 0.67
VCPKMT-202ENST00000395860 EFCAB7A8K855 629 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 HYAL3O43820 417 aaPredicted RBP19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 DNAJA2O60884 412 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 PPIBP23284 216 aaKnown RBP19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 MPIP34949 423 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 GPC1P35052 558 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 GSK3BP49841 420 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 PDX1P52945 283 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 E2F1Q01094 437 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 CEBPEQ15744 281 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 SYT16Q17RD7 645 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 ZNF750Q32MQ0 723 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 CYB5D1Q6P9G0 228 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 TMEM126BQ8IUX1 230 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 CCDC116Q8IYX3 515 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 CLEC4FQ8N1N0 589 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 TMEM52Q8NDY8 209 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 OR10A6Q8NH74 314 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 ZFP90Q8TF47 636 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 TANKQ92844 425 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 ASB9Q96DX5 294 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 PIF1Q9H611 641 aa19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 MRPS33Q9Y291 106 aaKnown RBP19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 TMEM184BQ9Y519 407 aaPredicted RBP19.23■□□□□ 0.67
VCPKMT-202ENST00000395860 A0A1B0GX78 115 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 ATXN8OSP0DMR3 200 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 UQCRC2P22695 453 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 OR1D4P47884 311 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 XKP51811 444 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 TRIM25Q14258 630 aaKnown RBP19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 STPG1Q5TH74 334 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 OR4N5Q8IXE1 308 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 OR51Q1Q8NH59 317 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 ZNF681Q96N22 645 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 RBCK1Q9BYM8 510 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 CXorf36Q9H7Y0 433 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 CORO2BQ9UQ03 480 aa19.22■□□□□ 0.67
VCPKMT-202ENST00000395860 A0A1W2PS29 197 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 BLACEA4D250 179 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 LDB3O75112 727 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 CHI3L1P36222 383 aaPredicted RBP19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 CDK9P50750 372 aaKnown RBP19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 MS4A2Q01362 244 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 FOLH1Q04609 750 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 DUSP2Q05923 314 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 ANGPTL8Q6UXH0 198 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 BPHLQ86WA6 291 aaPredicted RBP19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 PPP1R3BQ86XI6 285 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 OR5AK3PQ8NH89 298 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 SUN3Q8TAQ9 357 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms