RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ADRA1BP35368 520 aa14.2□□□□□ -0.14
CCDC50-201ENST00000392455 LRP8Q14114 963 aa14.2□□□□□ -0.14
CCDC50-201ENST00000392455 REEP3Q6NUK4 255 aa14.2□□□□□ -0.14
CCDC50-201ENST00000392455 CYP4V2Q6ZWL3 525 aaPredicted RBP14.2□□□□□ -0.14
CCDC50-201ENST00000392455 OR7G1Q8NGA0 311 aa14.2□□□□□ -0.14
CCDC50-201ENST00000392455 COQ10BQ9H8M1 238 aa14.2□□□□□ -0.14
CCDC50-201ENST00000392455 TMLHEQ9NVH6 421 aa14.2□□□□□ -0.14
CCDC50-201ENST00000392455 CPED1A4D0V7 1026 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 HMX3A6NHT5 357 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 RPP14O95059 124 aaKnown RBP14.19□□□□□ -0.14
CCDC50-201ENST00000392455 AK1P00568 194 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 ALDOAP04075 364 aaKnown RBP14.19□□□□□ -0.14
CCDC50-201ENST00000392455 SGPP2Q8IWX5 399 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 HORMAD2Q8N7B1 307 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 ZFAND2BQ8WV99 257 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 ACDQ96AP0 544 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 LNX2Q8N448 690 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 FAM109AQ8N4B1 249 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 SAMD11Q96NU1 681 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 OR2M4Q96R27 311 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 BCAS3Q9H6U6 928 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 PRMT8Q9NR22 394 aaPredicted RBP14.19□□□□□ -0.14
CCDC50-201ENST00000392455 LRRC10BA6NIK2 292 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 EIF4EP06730 217 aaKnown RBP14.19□□□□□ -0.14
CCDC50-201ENST00000392455 FPR1P21462 350 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 MSMO1Q15800 293 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 SERPINA9Q86WD7 417 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 SUMF2Q8NBJ7 301 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 CD99L2Q8TCZ2 262 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 CORO2AQ92828 525 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 RNF170Q96K19 258 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 TPT1P8Q9HAU6 139 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 SMIM28A0A1B0GU29 152 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 MATN3O15232 486 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 OR6T1Q8NGN1 323 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.19□□□□□ -0.141e-7■■■□□ 18.8
CCDC50-201ENST00000392455 CHFRQ96EP1 664 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 ZNF641Q96N77 438 aaPredicted RBP14.19□□□□□ -0.14
CCDC50-201ENST00000392455 SPEF2Q9C093 1822 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 FER1L6Q2WGJ9 1857 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 TMEM88BA6NKF7 163 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 FSCN2O14926 492 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 PEX2P28328 305 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 STK19P49842 368 aaPredicted RBP14.19□□□□□ -0.14
CCDC50-201ENST00000392455 AFF3P51826 1226 aaKnown RBP14.19□□□□□ -0.14
CCDC50-201ENST00000392455 MEF2DQ14814 521 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 GPR68Q15743 365 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 FUT10Q6P4F1 479 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 VITQ6UXI7 678 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 UNC5DQ6UXZ4 953 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 DPF1Q92782 380 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 KREMEN1Q96MU8 473 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 FZD4Q9ULV1 537 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 PORP16435 677 aaPredicted RBP14.19□□□□□ -0.14
CCDC50-201ENST00000392455 AQP4P55087 323 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 TRAPPC6BQ86SZ2 158 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 ZNF599Q96NL3 588 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 GAL3ST1Q99999 423 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 ZNF559Q9BR84 538 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 PDZD7Q9H5P4 517 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 LUZP4Q9P127 313 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 SALL3Q9BXA9 1300 aa14.19□□□□□ -0.14
CCDC50-201ENST00000392455 SLC31A1O15431 190 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 CILPO75339 1184 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 SERPINA7P05543 415 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 ZNF33AQ06730 810 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 TSTQ16762 297 aaKnown RBP14.18□□□□□ -0.14
CCDC50-201ENST00000392455 PAPD4Q6PIY7 484 aaKnown RBP14.18□□□□□ -0.14
CCDC50-201ENST00000392455 TMEM220Q6QAJ8 160 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 ZFP82Q8N141 532 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 GRHL3Q8TE85 626 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 IL20RAQ9UHF4 553 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 DCCP43146 1447 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 E7ESA3 106 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 TGM5O43548 720 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 CTSOP43234 321 aaPredicted RBP14.18□□□□□ -0.14
CCDC50-201ENST00000392455 CTC1Q2NKJ3 1217 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 UAP1L1Q3KQV9 507 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 LRRC73Q5JTD7 316 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 TMEM225Q6GV28 225 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 GTF2H5Q6ZYL4 71 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 C1orf21Q9H246 121 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 FN3KRPQ9HA64 309 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 ACOT7O00154 380 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 MAP2K3P46734 347 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 GALNT10Q86SR1 603 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 HSD17B14Q9BPX1 270 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 NUDT9Q9BW91 350 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 DPEP3Q9H4B8 488 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 MOB1AQ9H8S9 216 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 AGAP14A8MT82 685 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 KITLGP21583 273 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 NMBRP28336 390 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 COQ5Q5HYK3 327 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 FAM162BQ5T6X4 162 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 FAM122CQ6P4D5 195 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 SLC5A11Q8WWX8 675 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 THAP4Q8WY91 577 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 TMEM74Q96NL1 305 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 A0A1W2PS29 197 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms