RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 BTN3A2P78410 334 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 UBXN2BQ14CS0 331 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 HS3ST5Q8IZT8 346 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 OR14C36Q8NHC7 312 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 NEK7Q8TDX7 302 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 MUL1Q969V5 352 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 IL12RB2Q99665 862 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 B3GNT4Q9C0J1 378 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 ZBTB20Q9HC78 741 aaPredicted RBP18.9■□□□□ 0.62
SHANK1-203ENST00000391813 SH2B3Q9UQQ2 575 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 A0A1B0GVC2 190 aa18.89■□□□□ 0.62
SHANK1-203ENST00000391813 DBIP07108 87 aaKnown RBP18.89■□□□□ 0.62
SHANK1-203ENST00000391813 PET100P0DJ07 73 aa18.89■□□□□ 0.62
SHANK1-203ENST00000391813 CST9Q5W186 159 aa18.89■□□□□ 0.62
SHANK1-203ENST00000391813 PYHIN1Q6K0P9 492 aa18.89■□□□□ 0.62
SHANK1-203ENST00000391813 AUTS2Q8WXX7 1259 aa18.89■□□□□ 0.62
SHANK1-203ENST00000391813 C1orf74Q96LT6 269 aa18.89■□□□□ 0.62
SHANK1-203ENST00000391813 SMOQ99835 787 aa18.89■□□□□ 0.62
SHANK1-203ENST00000391813 GSTO2Q9H4Y5 243 aa18.89■□□□□ 0.62
SHANK1-203ENST00000391813 OARD1Q9Y530 152 aa18.89■□□□□ 0.62
SHANK1-203ENST00000391813 KMOO15229 486 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 ARHGEF15O94989 841 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 ARFRP1Q13795 201 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 UBXN11Q5T124 520 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 LARP4Q71RC2 724 aaKnown RBP eCLIP18.89■□□□□ 0.61
SHANK1-203ENST00000391813 MS4A15Q8N5U1 240 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 GALNT11Q8NCW6 608 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 OTUB2Q96DC9 234 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 LRR1Q96L50 414 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 ZNF778Q96MU6 729 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.89■□□□□ 0.61
SHANK1-203ENST00000391813 TDP1Q9NUW8 608 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 ARNTLO00327 626 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 TIMP1P01033 207 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 GKN3PP0CG01 181 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 PDHA2P29803 388 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 VLDLRP98155 873 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 LILRA2Q8N149 483 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 NAA50Q9GZZ1 169 aaKnown RBP18.89■□□□□ 0.61
SHANK1-203ENST00000391813 CLDN4O14493 209 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 GDI1P31150 447 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 HTRA3P83110 453 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 ABRAXAS2Q15018 415 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 PAGE3Q5JUK9 113 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 SPRED1Q7Z699 444 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 ADAMTS19Q8TE59 1207 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 SUV39H2Q9H5I1 410 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 DCAF13Q9NV06 445 aaKnown RBP18.89■□□□□ 0.61
SHANK1-203ENST00000391813 OSER1Q9NX31 292 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 SOHLH2Q9NX45 425 aa18.89■□□□□ 0.61
SHANK1-203ENST00000391813 MYH7P12883 1935 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 PAK4O96013 591 aaPredicted RBP18.88■□□□□ 0.61
SHANK1-203ENST00000391813 ATP1B2P14415 290 aaPredicted RBP18.88■□□□□ 0.61
SHANK1-203ENST00000391813 PGAM2P15259 253 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 CST5P28325 142 aaPredicted RBP18.88■□□□□ 0.61
SHANK1-203ENST00000391813 WASP42768 502 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 CDKN2DP55273 166 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 GTF2IRD2BQ6EKJ0 949 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 GTF2IRD2Q86UP8 949 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 UMODL1-AS1Q8N2C9 162 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 PARP16Q8N5Y8 322 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 MED30Q96HR3 178 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 IGSF5Q9NSI5 407 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 TMEM184CQ9NVA4 438 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 GSTM4Q03013 218 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 APOFQ13790 326 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 BCL2L15Q5TBC7 163 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 CEACAM19Q7Z692 300 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 METTL4Q8N3J2 472 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 ACBD7Q8N6N7 88 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 RBM18Q96H35 190 aaKnown RBP18.88■□□□□ 0.61
SHANK1-203ENST00000391813 MMP28Q9H239 520 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 AP1M2Q9Y6Q5 423 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 MTMR11A4FU01 709 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 PIRO00625 290 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 PRAF2O60831 178 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 CSN2P05814 226 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 SLC6A6P31641 620 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 HK3P52790 923 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 BBS10Q8TAM1 723 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 ADAD1Q96M93 576 aaKnown RBP18.88■□□□□ 0.61
SHANK1-203ENST00000391813 TOX2Q96NM4 488 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 PFDN5Q99471 154 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 ADAP2Q9NPF8 381 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 IL37Q9NZH6 218 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 PCTPQ9UKL6 214 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 DLGAP4Q9Y2H0 992 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 PCDHGA12O60330 932 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 CHRNB1P11230 501 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 ZNF691Q5VV52 312 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 TMIGD1Q6UXZ0 262 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 SLC5A8Q8N695 610 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 OR2T33Q8NG76 320 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 OR4K1Q8NGD4 311 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 OR6C4Q8NGE1 309 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 OR10G6Q8NH81 332 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 TMEM185BQ9H7F4 350 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 NDUFAF4Q9P032 175 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 PCDHGB2Q9Y5G2 931 aa18.88■□□□□ 0.61
SHANK1-203ENST00000391813 RPS13P62277 151 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms