RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 SMC3Q9UQE7 1217 aa0.74□□□□□ -2.29
RNU6-1228P-201ENST00000391014 FBN3Q75N90 2809 aa0.74□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MYO10Q9HD67 2058 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 hCG_1809904A0A1W2PP81 198 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 A0A1W2PPE2 198 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 A0A1W2PR64 198 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 NPIPA3F8WFD2 350 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 EPB41L2O43491 1005 aaKnown RBP0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ZBED4O75132 1171 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PSMD10O75832 226 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ABCB1P08183 1280 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PORP16435 677 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 UGT1A6P19224 532 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 GABRR1P24046 479 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CALML3P27482 149 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MC5RP33032 325 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SLC1A3P43003 542 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 RGS7P49802 495 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 LIG4P49917 911 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SLC12A3P55017 1021 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 DIO3P55073 304 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 STK4Q13043 487 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CHAF1BQ13112 559 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ANKRD55Q3KP44 614 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PLPP4Q5VZY2 271 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 FAM219BQ5XKK7 198 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 IL34Q6ZMJ4 242 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 GPR141Q7Z602 305 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 NRARPQ7Z6K4 114 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ZNF547Q8IVP9 402 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 FAM219AQ8IW50 185 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TAGAPQ8N103 731 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CERS5Q8N5B7 392 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ZNF397Q8NF99 534 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 C8orf46Q8TAG6 207 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SNRNP40Q96DI7 357 aaKnown RBP0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 BPIFA2Q96DR5 249 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SLC35E1Q96K37 410 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 GLT8D2Q9H1C3 349 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 EHD1Q9H4M9 534 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 IL1RL2Q9HB29 575 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PRODH2Q9UF12 536 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ANAPC2Q9UJX6 822 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PSG11Q9UQ72 335 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 FLVCR1Q9Y5Y0 555 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CHD4Q14839 1912 aa0.73□□□□□ -2.29
RNU6-1228P-201ENST00000391014 IGLV8-61A0A075B6I0 122 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 IGHV3OR16-12A0A075B7B8 117 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 A0A1W2PPW3 197 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TCRBV21S2A2A0A5A6 115 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PSMD3O43242 534 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 NUDT21O43809 227 aaKnown RBP0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 RTN2O75298 545 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MED6O75586 246 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 BEST1O76090 585 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 IGKV1D-16P01601 117 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 IGKV4-1P06312 121 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TBPP20226 339 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CAPN3P20807 821 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ACP1P24666 158 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 XCR1P46094 333 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CDX1P47902 265 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 FHITP49789 147 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 GMPSP49915 693 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 RPS8P62241 208 aaKnown RBP0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PDE7AQ13946 482 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SLC17A1Q14916 467 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SLC10A1Q14973 349 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 WTAPQ15007 396 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SLC22A10Q63ZE4 541 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 C1orf122Q6ZSJ8 110 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PHLDB2Q86SQ0 1253 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CACUL1Q86Y37 369 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TDHQ8IZJ6 230 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SAP25Q8TEE9 199 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 C19orf24Q9BVV8 132 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 APOL6Q9BWW8 343 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MIEF1Q9NQG6 463 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 RAI14Q9P0K7 980 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 VPS28Q9UK41 221 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 RUVBL2Q9Y230 463 aaKnown RBP0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PDE10AQ9Y233 779 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 EXOC6BQ9Y2D4 811 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PRG3Q9Y2Y8 225 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PCDHGA1Q9Y5H4 931 aa0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MAGED1Q9Y5V3 778 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 RAI1Q7Z5J4 1906 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1228P-201ENST00000391014 FBN1P35555 2871 aaKnown RBP0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 SLIT3O75094 1523 aa0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 SLC15A5A6NIM6 579 aa0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 CCSO14618 274 aa0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ACSL4O60488 711 aa0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 DUSP11O75319 330 aaKnown RBP0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 TOXO94900 526 aa0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 H2AFZP0C0S5 128 aa0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ACAT1P24752 427 aaKnown RBP0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 HOXD10P28358 340 aa0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 SRD5A2P31213 254 aa0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ZNF131P52739 623 aa0.71□□□□□ -2.3
RNU6-1228P-201ENST00000391014 SUCLG1P53597 346 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms