RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 PGRMC2O15173 223 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 B4GAT1O43505 415 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 DUSP11O75319 330 aaKnown RBP0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 MED6O75586 246 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 MMP23AO75900 390 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 SP9P0CG40 484 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 IDSP22304 550 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 HSD17B3P37058 310 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 PSMB10P40306 273 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 PLPP4Q5VZY2 271 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 SLC27A4Q6P1M0 643 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 MOB1BQ7L9L4 216 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 LINC00346Q8IVM7 164 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 MYOCDQ8IZQ8 938 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 CCDC71LQ8N9Z2 235 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 SLC4A11Q8NBS3 891 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 C8orf46Q8TAG6 207 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 UCMAQ8WVF2 138 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 P2RX5Q93086 422 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 SLC35C1Q96A29 364 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 TMCO6Q96DC7 493 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF641Q96N77 438 aaPredicted RBP0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 PLA2G2FQ9BZM2 168 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 DPEP2Q9H4A9 486 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 NXF3Q9H4D5 531 aaKnown RBP0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 CNOT10Q9H9A5 744 aaKnown RBP0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 ELL3Q9HB65 397 aaPredicted RBP0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZDHHC4Q9NPG8 344 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 DPM3Q9P2X0 92 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 AASSQ9UDR5 926 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 PARD3Q8TEW0 1356 aa0.34□□□□□ -2.35
RNU6-239P-201ENST00000390990 TRABD2BA6NFA1 517 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 USP27XA6NNY8 438 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 TRAF3IP2O43734 574 aaPredicted RBP0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 USO1O60763 962 aaKnown RBP0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 AGR2O95994 175 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 IGHV3-9P01782 118 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 DCNP07585 359 aaKnown RBP0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 EEF2P13639 858 aaKnown RBP0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 CD99P14209 185 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 MFAP2P55001 183 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 PSMC6P62333 389 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 SULT2A1Q06520 285 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 SLAQ13239 276 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 G3BP1Q13283 466 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 PTPRCAPQ14761 206 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 SLC17A1Q14916 467 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 LINC00483Q53H64 154 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 TOR1AIP1Q5JTV8 583 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 PLEKHS1Q5SXH7 462 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 FAM71E1Q6IPT2 247 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 LINC01551Q86U37 167 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 AMIGO1Q86WK6 493 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 UNC5CLQ8IV45 518 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 ZNF695Q8IW36 515 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 APCDD1Q8J025 514 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 BBS1Q8NFJ9 593 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 TSPAN14Q8NG11 270 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 OR1K1Q8NGR3 316 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 RDH5Q92781 318 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 RBMXL1Q96E39 390 aaKnown RBP0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 OR51J1Q9H342 316 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 DPEP3Q9H4B8 488 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 PDE10AQ9Y233 779 aa0.34□□□□□ -2.36
RNU6-239P-201ENST00000390990 IGLV2-18A0A075B6J9 118 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 IGKV3D-11A0A0A0MRZ8 115 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 PI4KAP2A4QPH2 592 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 AGAP14A8MT82 685 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 B4E171 279 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 ABCD4O14678 606 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 PTP4A3O75365 173 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 SLC2A10O95528 541 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 CYP11B1P15538 503 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 EPORP19235 508 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 GCH1P30793 250 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 SSTR1P30872 391 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 MAN1A1P33908 653 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 NUDT1P36639 197 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 ACVR1BP36896 505 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 TSPAN7P41732 249 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 SLC1A3P43003 542 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 FHITP49789 147 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 SLC26A2P50443 739 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 ARHGDIBP52566 201 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 MTCP1P56278 107 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 IL10RBQ08334 325 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 BAATQ14032 418 aaPredicted RBP0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 EMC2Q15006 297 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 TSPO2Q5TGU0 170 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 MOXD1Q6UVY6 613 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 ZNF730Q6ZMV8 503 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 HMGN2P46Q86SG4 172 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 CPXCR1Q8N123 301 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 OR10H4Q8NGA5 316 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 GPR148Q8TDV2 347 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 TEKT4Q8WW24 435 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 MYDGFQ969H8 173 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 FOPNLQ96NB1 174 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 ST6GALNAC5Q9BVH7 336 aa0.33□□□□□ -2.36
RNU6-239P-201ENST00000390990 APOL6Q9BWW8 343 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms