RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 CT45A8P0DMV1 189 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 CT45A9P0DMV2 189 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 ATP6V1B1P15313 513 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 GLRA1P23415 457 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 PGFP49763 221 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 GEMP55040 296 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 UCP2P55851 309 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 RPL27P61353 136 aaKnown RBP3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 GALK2Q01415 458 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 MFGE8Q08431 387 aaPredicted RBP3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 NPRL3Q12980 569 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 GK2Q14410 553 aaPredicted RBP3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 MEF2DQ14814 521 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 OR1C1Q15619 314 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 TRADDQ15628 312 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 C2orf76Q3KRA6 126 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 POM121L1PQ3SYA9 428 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 CT45A2Q5DJT8 189 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 DCAF12Q5T6F0 453 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 Q6ZRG5 221 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 RPAINQ86UA6 219 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 P2RY8Q86VZ1 359 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 WDR49Q8IV35 697 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 FBXW8Q8N3Y1 598 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 SIDT2Q8NBJ9 832 aaKnown RBP3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 OR4Q3Q8NH05 313 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 OR4A16Q8NH70 328 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 GOLGA5Q8TBA6 731 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 TAF15Q92804 592 aaKnown RBP eCLIP3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 GLYATL1Q969I3 302 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 MRPL9Q9BYD2 267 aaKnown RBP3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 TSPYL1Q9H0U9 437 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 PNNQ9H307 717 aaKnown RBP3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 GNB4Q9HAV0 340 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 GDF3Q9NR23 364 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 RARRES3Q9UL19 164 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 CSAG2Q9Y5P2 127 aa3.54□□□□□ -1.84
SNORA40.2-201ENST00000390847 SALL1Q9NSC2 1324 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 TEX48A0A1B0GUV7 120 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 RPL37AP8A6NKH3 93 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 ERI2A8K979 691 aaKnown RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 ZNF724A8MTY0 619 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 GALR3O60755 368 aaPredicted RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 KINO60870 393 aaKnown RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 CSDE1O75534 798 aaKnown RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 OR9G9P0C7N8 305 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 UGT1A6P19224 532 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 SPRP35270 261 aaPredicted RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 GSK3BP49841 420 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 DSCR10P59022 87 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 LMO4P61968 165 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 GSTO1P78417 241 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 ZFP36L1Q07352 338 aaKnown RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 RPA4Q13156 261 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 SLC17A1Q14916 467 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 TMEM44Q2T9K0 475 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 TCTEX1D4Q5JR98 221 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 C9orf66Q5T8R8 295 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 C1orf189Q5VU69 101 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 EMBQ6PCB8 327 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 RAPH1Q70E73 1250 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 TMUB2Q71RG4 321 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 NUFIP2Q7Z417 695 aaKnown RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 LYG1Q8N1E2 194 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 PARP8Q8N3A8 854 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 SFRP1Q8N474 314 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 GVQW1Q8N7I0 195 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 ZNF781Q8N8C0 355 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 OR6M1Q8NGM8 313 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 OR4L1Q8NH43 312 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 CDHR1Q96JP9 859 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 CABS1Q96KC9 395 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 RUNDC3BQ96NL0 473 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 FAM213AQ9BRX8 229 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 RPP25Q9BUL9 199 aaKnown RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 ABCG4Q9H172 646 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 CXXC4Q9H2H0 198 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 MID1IP1Q9NPA3 183 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 DDX28Q9NUL7 540 aaKnown RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 TECRQ9NZ01 308 aaKnown RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 EIF3KQ9UBQ5 218 aaKnown RBP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 FBXO7Q9Y3I1 522 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 CPQQ9Y646 472 aa3.53□□□□□ -1.84
SNORA40.2-201ENST00000390847 SH3PXD2BA1X283 911 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 SLC28A1O00337 649 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 TXNL1O43396 289 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 HPP00738 406 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 SFTPBP07988 381 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 MBL2P11226 248 aaPredicted RBP3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 P4HA1P13674 534 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 CYP3A5P20815 502 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 GATA2P23769 480 aaPredicted RBP3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 IL4RP24394 825 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 COPB2P35606 906 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 ARF5P84085 180 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 UBXN1Q04323 297 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 ACTN3Q08043 901 aaPredicted RBP3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 HSPA14Q0VDF9 509 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms