RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 SPATA6LQ8N4H0 392 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 PAQR8Q8TEZ7 354 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 CDKL2Q92772 493 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 NINJ1Q92982 152 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 SENP5Q96HI0 755 aaPredicted RBP16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 ART5Q96L15 291 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 GPR22Q99680 433 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 CD244Q9BZW8 370 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 PHACTR1Q9C0D0 580 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 CAB39LQ9H9S4 337 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 SH2D2AQ9NP31 389 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 SMYD2Q9NRG4 433 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 MS4A12Q9NXJ0 267 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 QPCTLQ9NXS2 382 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 TXNDC16Q9P2K2 825 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 B4GALT7Q9UBV7 327 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 Q9UFV3 132 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 L3MBTL1Q9Y468 752 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 MTORP42345 2549 aa16.51■□□□□ 0.23
RPUSD3-201ENST00000383820 EFCAB8A8MWE9 144 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 PHGDHO43175 533 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 CCNT2O60583 730 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 S100BP04271 92 aaPredicted RBP16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 IGKV3-11P04433 115 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 CELA3AP09093 270 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 RIPPLY2Q5TAB7 128 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 MED27Q6P2C8 311 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 CYS1Q717R9 158 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 CREG2Q8IUH2 290 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 BBOF1Q8ND07 529 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 SREK1Q8WXA9 508 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 CMTM7Q96FZ5 175 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 UBXN10Q96LJ8 280 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 DGAT2Q96PD7 388 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 KRT12Q99456 494 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 RBBP8Q99708 897 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 CPNE1Q99829 537 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 FOXC2Q99958 501 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 TRIM31Q9BZY9 425 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 CXXC4Q9H2H0 198 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 ADGRE2Q9UHX3 823 aa16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 BOKQ9UMX3 212 aaPredicted RBP16.5■□□□□ 0.23
RPUSD3-201ENST00000383820 NF1P21359 2839 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 RTCAO00442 366 aaKnown RBP16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 FGF17O60258 216 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 PIGAP37287 484 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 ADH7P40394 386 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 SSR2P43308 183 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 DLX5P56178 289 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 PLIN5Q00G26 463 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 ID2Q02363 134 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 ZKSCAN8Q15776 578 aaPredicted RBP16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 KHDRBS2Q5VWX1 349 aaKnown RBP16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 ADGRD1Q6QNK2 874 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 ARSKQ6UWY0 536 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 LIX1LQ8IVB5 337 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 C9orf40Q8IXQ3 194 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 PYROXD1Q8WU10 500 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 TANKQ92844 425 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 SPACA9Q96E40 222 aaPredicted RBP16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 RBM18Q96H35 190 aaKnown RBP16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 FBXL20Q96IG2 436 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 EXO5Q9H790 373 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 RPF2Q9H7B2 306 aaKnown RBP16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 ZNF703Q9H7S9 590 aaPredicted RBP16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 ZFP64Q9NPA5 681 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 ACKR4Q9NPB9 350 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 SEMA4BQ9NPR2 832 aaPredicted RBP16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 DNAJB12Q9NXW2 375 aaKnown RBP16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 CNIH4Q9P003 139 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 RNF112Q9ULX5 631 aa16.49■□□□□ 0.23
RPUSD3-201ENST00000383820 EIF3HO15372 352 aaKnown RBP eCLIP16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 CTAG2O75638 210 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 PIAS1O75925 651 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 NADKO95544 446 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 TGFB1P01137 390 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 ENDOUP21128 410 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 GP5P40197 560 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 RPL21P46778 160 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 ARFIP1P53367 373 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 IST1P53990 364 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 RAB10P61026 200 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 KCNJ2P63252 427 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 DEPDC1Q5TB30 811 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 OR4C11Q6IEV9 310 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 LYPD8Q6UX82 237 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 LRRC25Q8N386 305 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 FBXW8Q8N3Y1 598 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 OR7G3Q8NG95 312 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 STAG3L4Q8TBR4 150 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 PELOQ9BRX2 385 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 CENPKQ9BS16 269 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 TMUB1Q9BVT8 246 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 NUDT4Q9NZJ9 180 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 SPRR3Q9UBC9 169 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 PHF11Q9UIL8 331 aa16.48■□□□□ 0.23
RPUSD3-201ENST00000383820 ARHGAP21Q5T5U3 1957 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 HSPB2A8KAH6 182 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms