RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 FBXO42Q6P3S6 717 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CERS6Q6ZMG9 384 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.56□□□□□ -1.841e-6■■■■□ 21.8
SMC6-202ENST00000381272 TPGS1Q6ZTW0 290 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 DET1Q7L5Y6 550 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 RD3Q7Z3Z2 195 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 PIWIL3Q7Z3Z3 882 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 SNX20Q7Z614 316 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 GALNT5Q7Z7M9 940 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 GALNT10Q86SR1 603 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 RBM23Q86U06 439 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 CROCCP3Q8IVE0 287 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 RBFAQ8N0V3 343 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SPARTQ8N0X7 666 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SLC15A4Q8N697 577 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ARL14EPQ8N8R7 260 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 LEMD2Q8NC56 503 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 GPR26Q8NDV2 337 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CHDHQ8NE62 594 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 ZNF555Q8NEP9 628 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ZNF420Q8TAQ5 688 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 CNIH3Q8TBE1 160 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SKA2Q8WVK7 121 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 OVCA2Q8WZ82 227 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 PYCR2Q96C36 320 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SDCCAG3Q96C92 435 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 FAM120BQ96EK7 910 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 ALG14Q96F25 216 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ZNF764Q96H86 408 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 PLEKHA8Q96JA3 519 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 EGLN2Q96KS0 407 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CCDC138Q96M89 665 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CCDC115Q96NT0 180 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 BBC3Q96PG8 261 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 TSSK3Q96PN8 268 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 HEPHQ9BQS7 1158 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 TMEM175Q9BSA9 504 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ACPTQ9BZG2 426 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CCDC90BQ9GZT6 254 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ZNF106Q9H2Y7 1883 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 CLMPQ9H6B4 373 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 RETREG1Q9H6L5 497 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CWH43Q9H720 699 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ELAC1Q9H777 363 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 BRD9Q9H8M2 597 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 GORASP2Q9H8Y8 452 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ZNF334Q9HCZ1 680 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 DCAF13Q9NV06 445 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 TMEM45AQ9NWC5 275 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 PAK1IP1Q9NWT1 392 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 C1orf109Q9NX04 203 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 VNN3Q9NY84 501 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 MYOFQ9NZM1 2061 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 MTRRQ9UBK8 725 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 WARS2Q9UGM6 360 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 ABT1Q9ULW3 272 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 VPS4AQ9UN37 437 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 PDE10AQ9Y233 779 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 COX11Q9Y6N1 276 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 DGKBQ9Y6T7 804 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 OBSL1O75147 1896 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 TRBV5-4A0A0C4DH59 114 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 LOC100130705A0A1B0GUX0 176 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 NPIPB15A6NHN6 443 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 C16orf96A6NNT2 1141 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 MYO1GB0I1T2 1018 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 FAM220BPB1ANY3 271 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 BOLA2-SMG1P6H3BVE0 249 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 hCG_2039718K7EN88 272 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 TOR1BO14657 336 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 PRRG1O14668 218 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SLC16A6O15403 523 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 XPNPEP2O43895 674 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SH3BGRLO75368 114 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ZNF821O75541 412 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 STK16O75716 305 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 WDR47O94967 919 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 INMTO95050 263 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CLDN9O95484 217 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ZNF682O95780 498 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 BCL10O95999 233 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 HPRP00739 348 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ANXA5P08758 320 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CYP4B1P13584 511 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 GJA1P17302 382 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 FBLP22087 321 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 GATA3P23771 443 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 GSTM2P28161 218 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 HTR1BP28222 390 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 FMO3P31513 532 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CCR7P32248 378 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CD70P32970 193 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 TTKP33981 857 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SPAM1P38567 509 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 DCTP40126 519 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 MAP2K4P45985 399 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 STK19P49842 368 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 ANXA11P50995 505 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 GZMMP51124 257 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CCR3P51677 355 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms