RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 UXTQ9UBK9 157 aaPredicted RBP8.96□□□□□ -0.97
PTPRA-204ENST00000380393 UTS2RQ9UKP6 389 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 MMACHCQ9Y4U1 282 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 LAMA2P24043 3122 aaKnown RBP8.96□□□□□ -0.98
PTPRA-204ENST00000380393 MEX3AA1L020 520 aaKnown RBP8.96□□□□□ -0.98
PTPRA-204ENST00000380393 POLBP06746 335 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 ITGA3P26006 1051 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 MAGEA12P43365 314 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 STAT5BP51692 787 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 AGFG1P52594 562 aaKnown RBP8.96□□□□□ -0.98
PTPRA-204ENST00000380393 PDZK1IP1Q13113 114 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 CBLBQ13191 982 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 SF3A2Q15428 464 aaKnown RBP8.96□□□□□ -0.98
PTPRA-204ENST00000380393 LBHQ53QV2 105 aaPredicted RBP8.96□□□□□ -0.98
PTPRA-204ENST00000380393 SFRP5Q5T4F7 317 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 FAM219BQ5XKK7 198 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 CD276Q5ZPR3 534 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 STEAP4Q687X5 459 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 ETFRF1Q6IPR1 90 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 WASH2PQ6VEQ5 465 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 COMTD1Q86VU5 262 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 SVBPQ8N300 66 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 DTWD1Q8N5C7 304 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 POMGNT2Q8NAT1 580 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 UXS1Q8NBZ7 420 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 OR5J2Q8NH18 312 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 KATNB1Q9BVA0 655 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 B3GNT5Q9BYG0 378 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 ACTR8Q9H981 624 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 SPACA1Q9HBV2 294 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 DUSP22Q9NRW4 184 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 TAS2R3Q9NYW6 316 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 PHF11Q9UIL8 331 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 BACE2Q9Y5Z0 518 aa8.96□□□□□ -0.98
PTPRA-204ENST00000380393 VPS4BO75351 444 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 TRUB2O95900 331 aaKnown RBP8.95□□□□□ -0.98
PTPRA-204ENST00000380393 SBK3P0C264 359 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 SLC19A1P41440 591 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 LIMK2P53671 638 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 KRT33BQ14525 404 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 TKFCQ3LXA3 575 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 OR5M10Q6IEU7 315 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 RPL13AP3Q6NVV1 102 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 TMEM17Q86X19 198 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 CCNYQ8ND76 341 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 OR52K1Q8NGK4 314 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 KAT2AQ92830 837 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 GCDHQ92947 438 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-204ENST00000380393 RNF157Q96PX1 679 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 PEBP4Q96S96 227 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 CRISPLD1Q9H336 500 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 LIMD1Q9UGP4 676 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 ZMYM5Q9UJ78 669 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 FEM1BQ9UK73 627 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 SLC39A10Q9ULF5 831 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 TP53TG5Q9Y2B4 290 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 A0A1B0GW55 424 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 TOX3O15405 576 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-204ENST00000380393 TGM5O43548 720 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 SEC22BO75396 215 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 DUX4L2P0CJ85 424 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 DUX4L3P0CJ86 424 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 DUX4L4P0CJ87 422 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 DUX4L5P0CJ88 424 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 DUX4L6P0CJ89 424 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 DUX4L7P0CJ90 424 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 CYP2B6P20813 491 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 ATP4BP51164 291 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 NUTF2P61970 127 aaKnown RBP8.95□□□□□ -0.98
PTPRA-204ENST00000380393 GPRC6AQ5T6X5 926 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 RGMBQ6NW40 437 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 PLEKHH3Q7Z736 793 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 FSTL5Q8N475 847 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-204ENST00000380393 KIAA1143Q96AT1 154 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-204ENST00000380393 BARD1Q99728 777 aaKnown RBP8.95□□□□□ -0.98
PTPRA-204ENST00000380393 MAGEB5Q9BZ81 275 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 TXNRD2Q9NNW7 524 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 COX16Q9P0S2 106 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 DUX4Q9UBX2 424 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 ING1Q9UK53 422 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-204ENST00000380393 GPR45Q9Y5Y3 372 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 A0A087X0M5 115 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 IQCMA0A1B0GVH7 501 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 A0A1B0GX30 115 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 KRT33AO76009 404 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 SERPINA3P01011 423 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 ALDOBP05062 364 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 CBSLP0DN79 551 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 CBSP35520 551 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 TNFSF9P41273 254 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 CCR6P51684 374 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.95□□□□□ -0.98
PTPRA-204ENST00000380393 GFOD2Q3B7J2 385 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 TRIM69Q86WT6 500 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 DENND6AQ8IWF6 608 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 RXFP2Q8WXD0 754 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 LRIG1Q96JA1 1093 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 MYOCQ99972 504 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 SUCNR1Q9BXA5 334 aa8.95□□□□□ -0.98
PTPRA-204ENST00000380393 TMPRSS5Q9H3S3 457 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms