RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PRAMEF13Q5VWM6 474 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 SHQ1Q6PI26 577 aaKnown RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 HAGHLQ6PII5 290 aaPredicted RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 GLB1LQ6UWU2 654 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CLEC20AQ6ZU45 233 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 SLC24A5Q71RS6 500 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 DET1Q7L5Y6 550 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CBLN2Q8IUK8 224 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 SPNS2Q8IVW8 549 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 DNAJC22Q8N4W6 341 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 WDSUB1Q8N9V3 476 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF527Q8NB42 609 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 UXS1Q8NBZ7 420 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 OR1S1Q8NH92 325 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 ZDHHC1Q8WTX9 485 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 OVCA2Q8WZ82 227 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 SCMH1Q96GD3 660 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 MSLNLQ96KJ4 702 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 KCNJ15Q99712 375 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 PRR14Q9BWN1 585 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 C11orf49Q9H6J7 331 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CRTAC1Q9NQ79 661 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 DLL4Q9NR61 685 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 GPR83Q9NYM4 423 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 GPR45Q9Y5Y3 372 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 PLXNA3P51805 1871 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 ARL5CA6NH57 179 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 ANXA2P2A6NMY6 339 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 CLCA1A8K7I4 914 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 ISM1B1AKI9 464 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 D6RAR5 112 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 H7C4K7 107 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 LZTS3O60299 673 aaPredicted RBP7.15□□□□□ -1.27
CDKL5-201ENST00000379989 ENGP17813 658 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 ASMTP46597 345 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 PLK1P53350 603 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 DIO3P55073 304 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 MC2RQ01718 297 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 TNFRSF17Q02223 184 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 AARDQ4LEZ3 155 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 CPZQ66K79 652 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 BICRALQ6AI39 1079 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 ANGPTL8Q6UXH0 198 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 DDX53Q86TM3 631 aaKnown RBP7.15□□□□□ -1.27
CDKL5-201ENST00000379989 SLC41A1Q8IVJ1 513 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 TMEM40Q8WWA1 233 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 HTR3CQ8WXA8 447 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 POM121Q96HA1 1249 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 ERMAPQ96PL5 475 aaPredicted RBP7.15□□□□□ -1.27
CDKL5-201ENST00000379989 TAPBPLQ9BX59 468 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 GABARAPL1Q9H0R8 117 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 NT5DC2Q9H857 520 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 CDHR5Q9HBB8 845 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 ZNF334Q9HCZ1 680 aaPredicted RBP7.15□□□□□ -1.27
CDKL5-201ENST00000379989 EXTL2Q9UBQ6 330 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 PTPRDP23468 1912 aa7.15□□□□□ -1.27
CDKL5-201ENST00000379989 A8MT66 165 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 UBE2CO00762 179 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 TOXO94900 526 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 SIX6O95475 246 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 GLUD1P00367 558 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 IGLV3-25P01717 112 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 RB1P06400 928 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 HIST1H2AGP0C0S8 130 aaPredicted RBP7.14□□□□□ -1.27
CDKL5-201ENST00000379989 HIST1H2ADP20671 130 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 NUDT6P53370 316 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 MXD1Q05195 221 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 ILKQ13418 452 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 P2RY14Q15391 338 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 SF3A2Q15428 464 aaKnown RBP7.14□□□□□ -1.27
CDKL5-201ENST00000379989 KIAA0319Q5VV43 1072 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 HIST2H2AA3Q6FI13 130 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 GDF6Q6KF10 455 aaPredicted RBP7.14□□□□□ -1.27
CDKL5-201ENST00000379989 ALKAL2Q6UX46 152 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 CEP97Q8IW35 865 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 TRPV1Q8NER1 839 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 MOSPD2Q8NHP6 518 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 RNF139Q8WU17 664 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 SCRN2Q96FV2 425 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 MS4A3Q96HJ5 214 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 HIST1H2AHQ96KK5 128 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 RHOVQ96L33 236 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 LURAP1Q96LR2 239 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 MGLLQ99685 303 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 PITX2Q99697 317 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 HIST1H2AJQ99878 128 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 SSX3Q99909 188 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 SOX7Q9BT81 388 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 MED10Q9BTT4 135 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 TMEM43Q9BTV4 400 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 GORASP2Q9H8Y8 452 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 CRLF2Q9HC73 371 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 ATP13A1Q9HD20 1204 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 PLCXD1Q9NUJ7 323 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 GPATCH2LQ9NWQ4 482 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 TMEM161AQ9NX61 479 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 TREM2Q9NZC2 230 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 ZNF490Q9ULM2 529 aaPredicted RBP7.14□□□□□ -1.27
CDKL5-201ENST00000379989 TRBV23OR9-2A0A075B6M9 112 aa7.14□□□□□ -1.27
CDKL5-201ENST00000379989 CXorf51AA0A1B0GTR3 108 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms