RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 RPTNQ6XPR3 784 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 ZNF793Q6ZN11 406 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 SPPL2CQ8IUH8 684 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 SLC22A9Q8IVM8 553 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 ZNF808Q8N4W9 903 aaPredicted RBP17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 POGLUT1Q8NBL1 392 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 SRFBP1Q8NEF9 429 aaKnown RBP17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 OR4F6Q8NGB9 312 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 REPS1Q96D71 796 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 CMTM7Q96FZ5 175 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 KCNC2Q96PR1 638 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 TBCDQ9BTW9 1192 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 TMEM109Q9BVC6 243 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 ROGDIQ9GZN7 287 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 OR51B5Q9H339 312 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 MKS1Q9NXB0 559 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 SUCOQ9UBS9 1254 aaKnown RBP17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 VTI1BQ9UEU0 232 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 ADGRE2Q9UHX3 823 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 TRBV11-1A0A0K0K1C0 115 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 SAP18O00422 153 aaKnown RBP17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 RTCAO00442 366 aaKnown RBP17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 SUPT7LO94864 414 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 MYL2P10916 166 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 IMPDH1P20839 514 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 AGAP20933 346 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 PPP2R1BP30154 601 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 RPS13P62277 151 aaKnown RBP17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 ZNF844Q08AG5 666 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 SLC13A2Q13183 592 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 ELAVL1Q15717 326 aaKnown RBP17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 C3AR1Q16581 482 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 MAPKAPK3Q16644 382 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 CCDC153Q494R4 210 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 GGTA1PQ4G0N0 100 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 KHDRBS2Q5VWX1 349 aaKnown RBP17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 LETMD1Q6P1Q0 360 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 MILR1Q7Z6M3 343 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 SRRM1Q8IYB3 904 aaKnown RBP17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 TRPC4APQ8TEL6 797 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 NCLNQ969V3 563 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 L3HYPDHQ96EM0 354 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 APOPT1Q96IL0 206 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 CSF3RQ99062 836 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 COPS7BQ9H9Q2 264 aaPredicted RBP17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 PNO1Q9NRX1 252 aaKnown RBP17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 ZNF225Q9UK10 706 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 GRID1Q9ULK0 1009 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 GTF3C1Q12789 2109 aa17.6■□□□□ 0.41
TMEM88B-201ENST00000378821 NPIPA5E9PKD4 350 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 HNRNPRO43390 633 aaKnown RBP17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 ETHE1O95571 254 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 OTCP00480 354 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 ATP5A1P25705 553 aaKnown RBP17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 NEK2P51955 445 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 CASP6P55212 293 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 PHEXP78562 749 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 DEPDC1Q5TB30 811 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 XKRXQ6PP77 449 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 BNC2Q6ZN30 1099 aaPredicted RBP17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 TMEM132CQ8N3T6 1108 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 BANPQ8N9N5 519 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 FAM47BQ8NA70 645 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 MORN4Q8NDC4 146 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 C16orf52Q8NHV5 167 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 PTPMT1Q8WUK0 201 aaPredicted RBP17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 TMEM125Q96AQ2 219 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 SORBS1Q9BX66 1292 aaKnown RBP17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 NPIPA1Q9UND3 350 aa17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 KLF13Q9Y2Y9 288 aaPredicted RBP17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 YARS2Q9Y2Z4 477 aaKnown RBP17.59■□□□□ 0.41
TMEM88B-201ENST00000378821 PLPP1O14494 284 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 PRKNO60260 465 aaPredicted RBP17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 ITGA10O75578 1167 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 ZFAND5O76080 213 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 OR4F21O95013 312 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 HIST1H1TP22492 207 aaPredicted RBP17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 ARFIP1P53367 373 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 ADORA2A-AS1P86434 159 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 KRT71Q3SY84 523 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 FRG2Q64ET8 278 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 CHSY3Q70JA7 882 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 MRGPRGQ86SM5 289 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 SULF2Q8IWU5 870 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 GPALPP1Q8IXQ4 340 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 GHDCQ8N2G8 530 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 CPSF7Q8N684 471 aaKnown RBP17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 ACOT4Q8N9L9 421 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 CCDC63Q8NA47 563 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 ZFP62Q8NB50 900 aaPredicted RBP17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 C7orf57Q8NEG2 295 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 MTFMTQ96DP5 389 aaKnown RBP17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 FRG2BQ96QU4 278 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 ZNF382Q96SR6 550 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 ALOXE3Q9BYJ1 711 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 TSPAN10Q9H1Z9 355 aaPredicted RBP17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 GSTO2Q9H4Y5 243 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 TRPS1Q9UHF7 1281 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 TINAGQ9UJW2 476 aa17.58■□□□□ 0.4
TMEM88B-201ENST00000378821 PRSS44E7EML9 344 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms