RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 TRIM43BA6NCK2 446 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 FAAHO00519 579 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 ARHGAP33O14559 1287 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 TBX6O95947 436 aaPredicted RBP17.28■□□□□ 0.36
TDP2-202ENST00000378198 TIMP1P01033 207 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 ADRA2AP08913 450 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 ITGB8P26012 769 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 BSGP35613 385 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 ARHGAP19Q14CB8 494 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 TMEM201Q5SNT2 666 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 SLX4IPQ5VYV7 408 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 FAM180BQ6P0A1 224 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 C6orf120Q7Z4R8 191 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 C2orf73Q8N5S3 287 aaPredicted RBP17.28■□□□□ 0.36
TDP2-202ENST00000378198 DHRS1Q96LJ7 313 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 TEFMQ96QE5 360 aaKnown RBP17.28■□□□□ 0.36
TDP2-202ENST00000378198 TAPBPLQ9BX59 468 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 QPCTLQ9NXS2 382 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 GPC6Q9Y625 555 aaPredicted RBP17.28■□□□□ 0.36
TDP2-202ENST00000378198 LOC110117498-PIK3R3F6TDL0 507 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 SH3BP5O60239 455 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 DLGAP3O95886 979 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 ERGP11308 486 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 ADRB3P13945 408 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 ELAVL4P26378 380 aaKnown RBP17.28■□□□□ 0.36
TDP2-202ENST00000378198 GTF2E2P29084 291 aaKnown RBP17.28■□□□□ 0.36
TDP2-202ENST00000378198 CSTF2P33240 577 aaKnown RBP eCLIP17.28■□□□□ 0.36
TDP2-202ENST00000378198 FRKP42685 505 aaPredicted RBP17.28■□□□□ 0.36
TDP2-202ENST00000378198 GSTM5P46439 218 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 RPS26P62854 115 aaKnown RBP17.28■□□□□ 0.36
TDP2-202ENST00000378198 TMEM52BQ4KMG9 183 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 SPANXN2Q5MJ10 180 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 C12orf40Q86WS4 652 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 PIK3R3Q92569 461 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 TXNDC15Q96J42 360 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 ZNF354BQ96LW1 612 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 F2RL3Q96RI0 385 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 ACAT2Q9BWD1 397 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 PCDHGB6Q9Y5F9 930 aa17.28■□□□□ 0.36
TDP2-202ENST00000378198 A0A075B6Q4 140 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 EDDM13A0A1B0GTR0 161 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 FAM227AF5H4B4 570 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 HOXC11O43248 304 aaPredicted RBP17.27■□□□□ 0.36
TDP2-202ENST00000378198 ENTPD6O75354 484 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 H1F0P07305 194 aaKnown RBP17.27■□□□□ 0.36
TDP2-202ENST00000378198 ALOX12P18054 663 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 HSD17B2P37059 387 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 KCNJ5P48544 419 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 PCBP4P57723 403 aaKnown RBP17.27■□□□□ 0.36
TDP2-202ENST00000378198 SMIM11AP58511 58 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 HTRA4P83105 476 aaPredicted RBP17.27■□□□□ 0.36
TDP2-202ENST00000378198 NCF4Q15080 339 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 FNDC3BQ53EP0 1204 aaKnown RBP17.27■□□□□ 0.36
TDP2-202ENST00000378198 C9orf64Q5T6V5 341 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 C12orf73Q69YU5 71 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 TCTN3Q6NUS6 607 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 HEATR4Q86WZ0 1026 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 KLHL6Q8WZ60 621 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 SMPDL3AQ92484 453 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 TFGQ92734 400 aaPredicted RBP17.27■□□□□ 0.36
TDP2-202ENST00000378198 ZNF607Q96SK3 696 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 NUAK2Q9H093 628 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 C11orf16Q9NQ32 467 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 WASH6PQ9NQA3 447 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 CRNNQ9UBG3 495 aaPredicted RBP17.27■□□□□ 0.36
TDP2-202ENST00000378198 TAC3Q9UHF0 121 aa17.27■□□□□ 0.36
TDP2-202ENST00000378198 MUC22E2RYF6 1773 aaPredicted RBP17.27■□□□□ 0.35
TDP2-202ENST00000378198 RTCAO00442 366 aaKnown RBP17.27■□□□□ 0.35
TDP2-202ENST00000378198 ADH1CP00326 375 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 SCG5P05408 212 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 DEFA1P59665 94 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 DEFA3P59666 94 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 SELENBP1Q13228 472 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 SSX1Q16384 188 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 HNRNPA1L2Q32P51 320 aaKnown RBP17.27■□□□□ 0.35
TDP2-202ENST00000378198 LEXMQ3ZCV2 418 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 SPDYE7PQ495Y7 208 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 CASP12Q6UXS9 341 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 CCDC190Q86UF4 302 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 TRIM69Q86WT6 500 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 ZNF513Q8N8E2 541 aaPredicted RBP17.27■□□□□ 0.35
TDP2-202ENST00000378198 ANKRD53Q8N9V6 530 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 ZNF764Q96H86 408 aaPredicted RBP17.27■□□□□ 0.35
TDP2-202ENST00000378198 TMEM80Q96HE8 168 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 OPALINQ96PE5 141 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 IL4I1Q96RQ9 567 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 NT5DC2Q9H857 520 aa17.27■□□□□ 0.35
TDP2-202ENST00000378198 SIRT3Q9NTG7 399 aaPredicted RBP17.27■□□□□ 0.35
TDP2-202ENST00000378198 HMGN4O00479 90 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 SNPHO15079 494 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 OR10H3O60404 316 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 KCNK2O95069 426 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 RPN2P04844 631 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 TPTEP56180 551 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 HSPB3Q12988 150 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 SEC23BQ15437 767 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 TCEAL5Q5H9L2 206 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 GDPGP1Q6ZNW5 385 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 ERN2Q76MJ5 926 aaKnown RBP17.26■□□□□ 0.35
TDP2-202ENST00000378198 AMZ2Q86W34 360 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms