RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 IFNA6P05013 189 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 PCCBP05166 539 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 ETFAP13804 333 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 NT5EP21589 574 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 LHCGRP22888 699 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 ARNTP27540 789 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 GP2P55259 537 aaKnown RBP8.39□□□□□ -1.07
PCDH9-202ENST00000377865 CDK10Q15131 360 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 TAF13Q15543 124 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 SNAP47Q5SQN1 464 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 RPTNQ6XPR3 784 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF227Q86WZ6 799 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 OR52E4Q8NGH9 312 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 C1orf216Q8TAB5 229 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 FCAMRQ8WWV6 532 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 MSANTD3Q96H12 275 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 S100A13Q99584 98 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 C7orf50Q9BRJ6 194 aaKnown RBP8.39□□□□□ -1.07
PCDH9-202ENST00000377865 C1QTNF3Q9BXJ4 246 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 LYARQ9NX58 379 aaKnown RBP8.39□□□□□ -1.07
PCDH9-202ENST00000377865 IL17CQ9P0M4 197 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 USP22Q9UPT9 525 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 QSER1Q2KHR3 1735 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 TBC1D3BA6NDS4 549 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 CHURC1-FNTBB4DL54 471 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 TARM1B6A8C7 271 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF670-ZNF695F2Z2N8 137 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 GTPBP1O00178 669 aaKnown RBP8.39□□□□□ -1.07
PCDH9-202ENST00000377865 LRRTM2O43300 516 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 NUDT14O95848 222 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 SBK3P0C264 359 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 ACPPP15309 386 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 BPIP17213 487 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 CDKN1CP49918 316 aaPredicted RBP8.39□□□□□ -1.07
PCDH9-202ENST00000377865 ISL1P61371 349 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 SLC22A10Q63ZE4 541 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 SNX29P2Q8IUI4 249 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 DCUN1D3Q8IWE4 304 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 PHC2Q8IXK0 858 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 FAM83FQ8NEG4 500 aaPredicted RBP8.39□□□□□ -1.07
PCDH9-202ENST00000377865 PPIL3Q9H2H8 161 aaKnown RBP8.39□□□□□ -1.07
PCDH9-202ENST00000377865 POLR1DQ9Y2S0 133 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 J3QLW9 94 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 NDUFS4O43181 175 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 CACNG3O60359 315 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 ALPPL2P10696 532 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF19P17023 458 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 BMP8BP34820 402 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 MLLT3P42568 568 aaPredicted RBP8.39□□□□□ -1.07
PCDH9-202ENST00000377865 RAB40BQ12829 278 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 MARCH8Q5T0T0 291 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 BMP8AQ7Z5Y6 402 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 UBQLNLQ8IYU4 475 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 NAGSQ8N159 534 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 ADAMTS19Q8TE59 1207 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 C16orf78Q8WTQ4 265 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 PIGKQ92643 395 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 CTRCQ99895 268 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 SLC6A15Q9H2J7 730 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 HSFX1Q9UBD0 423 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 A0A0X1KG70 313 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 CPSF4LA6NMK7 179 aaKnown RBP8.39□□□□□ -1.07
PCDH9-202ENST00000377865 B8ZZF3 427 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 ANKRD28O15084 1053 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 MUSKO15146 869 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 KMOO15229 486 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 CHRNB1P11230 501 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 SLC6A6P31641 620 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 DGKEP52429 567 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 UGT3A2Q3SY77 523 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 CYP27C1Q4G0S4 372 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 OLFML2AQ68BL7 652 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 PYHIN1Q6K0P9 492 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 SLC30A6Q6NXT4 461 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 OR9Q2Q8NGE9 314 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 HUS1BQ8NHY5 278 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 FKBP10Q96AY3 582 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 YIPF6Q96EC8 236 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 MNTQ99583 582 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 TUBB1Q9H4B7 451 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 CTPS2Q9NRF8 586 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 B4GALT6Q9UBX8 382 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 MAU2Q9Y6X3 613 aa8.39□□□□□ -1.07
PCDH9-202ENST00000377865 UNC119BA6NIH7 251 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 MTX2O75431 263 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 SCG5P05408 212 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 IDUAP35475 653 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 PIGAP37287 484 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 MTNR1AP48039 350 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 ARSIQ5FYB1 569 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 KIAA0319Q5VV43 1072 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 CNIH2Q6PI25 160 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 DLEU7Q6UYE1 221 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 USP51Q70EK9 711 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 ENTHD1Q8IYW4 607 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 LINC01465Q8N7H1 131 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 BRI3BPQ8WY22 251 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 NLKQ9UBE8 527 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 OSGIN1Q9UJX0 560 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms