RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 KLHL2O95198 593 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 ETHE1O95571 254 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 ALDOAP04075 364 aaKnown RBP19.49■□□□□ 0.71
VSX1-201ENST00000376707 GFAPP14136 432 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 SSTR2P30874 369 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 STT3AP46977 705 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 SETDB1Q15047 1291 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 UBAP2Q5T6F2 1119 aaKnown RBP19.49■□□□□ 0.71
VSX1-201ENST00000376707 SLC22A16Q86VW1 577 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 OR4N5Q8IXE1 308 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 ZNF295-AS1Q8N0V1 137 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 RNF175Q8N4F7 328 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 GOLM1Q8NBJ4 401 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 NOA1Q8NC60 698 aaKnown RBP19.49■□□□□ 0.71
VSX1-201ENST00000376707 ZNF721Q8TF20 911 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 SGCZQ96LD1 299 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 GPR78Q96P69 363 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 SPOCK3Q9BQ16 436 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 FAM173AQ9BQD7 235 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 TTTY12Q9BZ98 90 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 RPF2Q9H7B2 306 aaKnown RBP19.49■□□□□ 0.71
VSX1-201ENST00000376707 ACTR8Q9H981 624 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 PHF11Q9UIL8 331 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 HRH3Q9Y5N1 445 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 PCNX1Q96RV3 2341 aa19.49■□□□□ 0.71
VSX1-201ENST00000376707 A0A096LPK6 155 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 A0A0G2JMM0 328 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 A0A1W2PPB8 328 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 A0A1W2PRS3 328 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 KIR3DP1A8MWS1 328 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 CNR1P21554 472 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 TLX1P31314 330 aaPredicted RBP19.48■□□□□ 0.71
VSX1-201ENST00000376707 PIK3CBP42338 1070 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 SERPINB8P50452 374 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 PHEXP78562 749 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 PLIN5Q00G26 463 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 PFKFB4Q16877 469 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 NDUFAF5Q5TEU4 345 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 GPR180Q86V85 440 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 MARVELD2Q8N4S9 558 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 MNS1Q8NEH6 495 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 ISL2Q96A47 359 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 RBM18Q96H35 190 aaKnown RBP19.48■□□□□ 0.71
VSX1-201ENST00000376707 SENP5Q96HI0 755 aaPredicted RBP19.48■□□□□ 0.71
VSX1-201ENST00000376707 MTERF1Q99551 399 aaKnown RBP19.48■□□□□ 0.71
VSX1-201ENST00000376707 ZDHHC11Q9H8X9 412 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 DMRT3Q9NQL9 472 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 SACM1LQ9NTJ5 587 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 TSC22D4Q9Y3Q8 395 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 PCDHGA11Q9Y5H2 935 aa19.48■□□□□ 0.71
VSX1-201ENST00000376707 FBN2P35556 2912 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 PLPP1O14494 284 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 P04436 131 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 TYK2P29597 1187 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 ECHS1P30084 290 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 MAGEA12P43365 314 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 NR0B1P51843 470 aaKnown RBP19.47■□□□□ 0.71
VSX1-201ENST00000376707 ALDH18A1P54886 795 aaKnown RBP19.47■□□□□ 0.71
VSX1-201ENST00000376707 IGLV3-21P80748 117 aaPredicted RBP19.47■□□□□ 0.71
VSX1-201ENST00000376707 TNFRSF17Q02223 184 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 ASPHQ12797 758 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 BIKQ13323 160 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 UAP1Q16222 522 aaPredicted RBP19.47■□□□□ 0.71
VSX1-201ENST00000376707 GLE1Q53GS7 698 aaKnown RBP19.47■□□□□ 0.71
VSX1-201ENST00000376707 LIPJQ5W064 366 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 KLC3Q6P597 504 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 FAM47EQ6ZV65 393 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 ZCCHC7Q8N3Z6 543 aaKnown RBP19.47■□□□□ 0.71
VSX1-201ENST00000376707 SLC44A1Q8WWI5 657 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 ASB5Q8WWX0 329 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 TANKQ92844 425 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 PPWD1Q96BP3 646 aaKnown RBP19.47■□□□□ 0.71
VSX1-201ENST00000376707 REPS1Q96D71 796 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 ART5Q96L15 291 aa19.47■□□□□ 0.71
VSX1-201ENST00000376707 CDC42EP4Q9H3Q1 356 aaKnown RBP19.47■□□□□ 0.71
VSX1-201ENST00000376707 GTF3C1Q12789 2109 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 NPIPA2E9PIF3 369 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 NPIPA3F8WFD2 350 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 ZNF354AO60765 605 aaPredicted RBP19.46■□□□□ 0.71
VSX1-201ENST00000376707 PTX3P26022 381 aaPredicted RBP19.46■□□□□ 0.71
VSX1-201ENST00000376707 BUD31P41223 144 aaPredicted RBP19.46■□□□□ 0.71
VSX1-201ENST00000376707 RPS13P62277 151 aaKnown RBP19.46■□□□□ 0.71
VSX1-201ENST00000376707 FOLH1Q04609 750 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 PCBP2Q15366 365 aaKnown RBP eCLIP19.46■□□□□ 0.71
VSX1-201ENST00000376707 MPEG1Q2M385 716 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 METTL2BQ6P1Q9 378 aaKnown RBP19.46■□□□□ 0.71
VSX1-201ENST00000376707 MEX3BQ6ZN04 569 aaKnown RBP19.46■□□□□ 0.71
VSX1-201ENST00000376707 NUBPLQ8TB37 319 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 SLC22A8Q8TCC7 542 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 CHTF18Q8WVB6 975 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 ZNF592Q92610 1267 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 RND1Q92730 232 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 FMO2Q99518 471 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 ENKD1Q9H0I2 346 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 IL1RL2Q9HB29 575 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.46■□□□□ 0.71
VSX1-201ENST00000376707 ATG4BQ9Y4P1 393 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 PKDREJQ9NTG1 2253 aa19.46■□□□□ 0.71
VSX1-201ENST00000376707 UGDHO60701 494 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 GLSO94925 669 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms